Research Output 1985 2019

2019
1 Citation (Scopus)

Aberrant FGFR signaling mediates resistance to CDK4/6 inhibitors in ER+ breast cancer

Formisano, L., Lu, Y., Servetto, A., Hanker, A. B., Jansen, V. M., Bauer, J. A., Sudhan, D. R., Guerrero-Zotano, A. L., Croessmann, S., Guo, Y., Ericsson, P. G., Lee, K. M., Nixon, M. J., Schwarz, L. J., Sanders, M. E., Dugger, T. C., Cruz, M. R., Behdad, A., Cristofanilli, M., Bardia, A. & 11 others, O’Shaughnessy, J., Nagy, R. J., Lanman, R. B., Solovieff, N., He, W., Miller, M., Su, F., Shyr, Y., Mayer, I. A., Balko, J. M. & Arteaga, C. L., 2019 Dec 1, In : Nature communications. 10, 1, 1373.

Research output: Contribution to journalArticle

Open Access
breast
inhibitors
cancer
Breast Neoplasms
Protein-Tyrosine Kinases

Active learning with simultaneous subject and variable selections

Ivan Chang, Y. C. & Chen, R-B., 2019 Feb 15, In : Neurocomputing. 329, p. 495-505 11 p.

Research output: Contribution to journalArticle

Problem-Based Learning
Patient Selection
Labels
Learning
Sample Size
1 Citation (Scopus)

A modified developmental care bundle reduces pain and stress in preterm infants undergoing examinations for retinopathy of prematurity: A randomised controlled trial

Chuang, L. J., Wang, S. H., Ma, M-C., Lin, C. N., Chen, C. L. & Huang, M-C., 2019 Feb 1, In : Journal of Clinical Nursing. 28, 3-4, p. 545-559 15 p.

Research output: Contribution to journalArticle

Patient Care Bundles
Retinopathy of Prematurity
Premature Infants
Randomized Controlled Trials
Pain
1 Citation (Scopus)

An active learning-based approach for location-aware acquaintance inference

Chen, B. H., Li, C-T., Chuang, K-T., Pang, J. & Zhang, Y., 2019 Jun 4, In : Knowledge and Information Systems. 59, 3, p. 539-569 31 p.

Research output: Contribution to journalArticle

Labeling
Recommender systems
Mobile devices
Feedback
Sensors

Analysis of a customized cervical collar to improve neck posture during smartphone usage: a comparative study in healthy subjects

Kuo, Y. R., Fang, J-J., Wu, C. T., Lin, R. M., Su, P-F. & Lin, C-L., 2019 Aug 1, In : European Spine Journal. 28, 8, p. 1793-1803 11 p.

Research output: Contribution to journalArticle

Posture
Healthy Volunteers
Neck
Head
Sports

A new demerit control chart for monitoring the quality of multivariate Poisson processes

Li, C. I., Pan, J. N. & Huang, M. H., 2019, In : Journal of Applied Statistics. 46, 4, p. 1-20

Research output: Contribution to journalArticle

Bayesian structure selection for vector autoregression model

Chu, C. H., Lo Huang, M. N., Huang, S. F. & Chen, R-B., 2019 Aug 1, In : Journal of Forecasting. 38, 5, p. 422-439 18 p.

Research output: Contribution to journalArticle

Vector Autoregression
Dimensionality
Coefficient
Multiple Time Series
Model structures

Bayesian variable selection in a finite mixture of linear mixed-effects models

Lee, K-J. & Chen, R-B., 2019 Sep 2, In : Journal of Statistical Computation and Simulation. 89, 13, p. 2434-2453 20 p.

Research output: Contribution to journalArticle

Bayesian Variable Selection
Linear Mixed Effects Model
Finite Mixture
Monte Carlo Sampling
Social sciences
2 Citations (Scopus)

beRBP: binding estimation for human RNA-binding proteins

Yu, H., Wang, J., Sheng, Q., Liu, Q. & Shyr, Y., 2019 Mar 18, In : Nucleic acids research. 47, 5, p. e26

Research output: Contribution to journalArticle

Open Access
RNA-Binding Proteins
RNA
Benchmarking
Protein Binding

Critical fault-detecting time evaluation in software with discrete compound Poisson models

Hsieh, M. H., Jeng, S-L. & Kvam, P., 2019 Jan 1, In : Journal of Quality Technology. 51, 1, p. 94-108 15 p.

Research output: Contribution to journalArticle

Managers
Software
Evaluation
Compound Poisson model
Fault
Monitoring
Normal distribution
Control charts
Process change
Moving average

Dynamic Changes of Health Utility in Lung Cancer Patients Receiving Different Treatments: A 7-Year Follow-up

Yang, S-C., Kuo, C. W., Lai, W-W., Lin, C-C., Su, W-C., Chang, S-M. & Wang, J. D., 2019 Jan 1, (Accepted/In press) In : Journal of Thoracic Oncology.

Research output: Contribution to journalArticle

Open Access
Lung Neoplasms
Health
Quality of Life
Drug Therapy
Therapeutics

Efficient Signal Inclusion With Genomic Applications

Jeng, X. J., Zhang, T. & Tzeng, J-Y., 2019 Jan 1, (Accepted/In press) In : Journal of the American Statistical Association.

Research output: Contribution to journalArticle

Genomics
Proportion
Single nucleotide Polymorphism
Inclusion
Adaptive Procedure

Erratum for the research article: Genomic proling of ER + breast cancers after short-term estrogen suppression reveals alterations associated with endocrine resistance (Science Translational Medicine DOI: 10.1126/scitranslmed.aai7993)

Giltnane, J. M., Hutchinson, K. E., Stricker, T. P., Formisano, L., Young, C. D., Estrada, M. V., Nixon, M. J., Du, L., Sanchez, V., Ericsson, P. G., Kuba, M. G., Sanders, M. E., Mu, X. J., Van Allen, E. M., Wagle, N., Mayer, I. A., Abramson, V., Gόmez, H., Rizzo, M., Toy, W. & 15 others, Chandarlapaty, S., Mayer, E. L., Christiansen, J., Murphy, D., Fitzgerald, K., Wang, K., Ross, J. S., Miller, V. A., Stephens, P. J., Yelensky, R., Garraway, L., Shyr, Y., Meszoely, I., Balko, J. M. & Arteaga, C. L., 2019 Feb 13, In : Science Translational Medicine. 11, 479, eaaw7620.

Research output: Contribution to journalComment/debate

Translational Medical Research
Estrogens
Breast Neoplasms
Research

Extramedullary leukemia behaving as solid cancer: clinical, histologic, and genetic clues to chemoresistance in organ sites

Cunningham, I., Hamele-Bena, D., Guo, Y., Shiomi, T., Papp, A. C., Chakravarti, B., Yang, J., Shyr, Y. & Fisher, R. A., 2019 Jan 1, (Accepted/In press) In : American Journal of Hematology.

Research output: Contribution to journalArticle

Leukemia
Neoplasms
Bone Marrow
Breast Neoplasms
Treatment Failure

Gender differences in inappropriate use of urinary catheters among hospitalized older patients

Hu, F. W., Chang, C-M., Su, P-F., Chen, H. Y. & Chen, C. H., 2019 Mar 4, In : Journal of Women and Aging. 31, 2, p. 165-175 11 p.

Research output: Contribution to journalArticle

Urinary Catheters
gender-specific factors
incidence
Catheters
demographic factors

Genetic loci determining total immunoglobulin E levels from birth through adulthood

Yao, T. C., Chung, R. H., Lin, C. Y., Tsai, P. C., Chang, W. C., Yeh, K. W., Tsai, M. H., Liao, S. L., Hua, M. C., Lai, S. H., Chen, L. C., Chang, S. W., Yu, Y. W., Hsu, J. Y., Chang, S. C., Cheng, W. C., Hu, D., Hong, X., Burchard, E. G., Wang, X. & 3 others, Tzeng, J-Y., Tsai, H. J. & Huang, J. L., 2019 Mar 1, In : Allergy: European Journal of Allergy and Clinical Immunology. 74, 3, p. 621-625 5 p.

Research output: Contribution to journalLetter

Greedy active learning algorithm for logistic regression models

Hsu, H. L., Chang, Y. C. I. & Chen, R-B., 2019 Jan 1, In : Computational Statistics and Data Analysis. 129, p. 119-134 16 p.

Research output: Contribution to journalArticle

Active Learning
Logistic Regression Model
Learning algorithms
Logistics
Learning Algorithm

HACER: An atlas of human active enhancers to interpret regulatory variants

Wang, J., Dai, X., Berry, L. D., Cogan, J. D., Liu, Q. & Shyr, Y., 2019 Jan 8, In : Nucleic acids research. 47, D1, p. D106-D112

Research output: Contribution to journalArticle

Open Access
Atlases
Transcription Factors
Gene Regulatory Networks
Nucleic Acid Regulatory Sequences
Genome-Wide Association Study

Health-related quality of life associated with different cancer treatments in Chinese breast cancer survivors in Taiwan

Ou, H-T., Chung, W-P., Su, P-F., Lin, T. H., Lin, J. Y., Wen, Y. C. & Fang, W. T., 2019 Jul 1, In : European Journal of Cancer Care. 28, 4, e13069.

Research output: Contribution to journalArticle

Taiwan
Survivors
Quality of Life
Breast Neoplasms
Neoplasms

Identification of Targetable Recurrent MAP3K8 Rearrangements in Melanomas Lacking Known Driver Mutations

Lehmann, B. D., Shaver, T. M., Johnson, D. B., Li, Z., Gonzalez-Ericsson, P. I., Sánchez, V., Shyr, Y., Sanders, M. E. & Pietenpol, J. A., 2019 Sep 1, In : Molecular cancer research : MCR. 17, 9, p. 1842-1853 12 p.

Research output: Contribution to journalArticle

Melanoma
Mutation
Mitogen-Activated Protein Kinases
Mitogen-Activated Protein Kinase Kinases
Atlases
1 Citation (Scopus)

Identifying individual risk rare variants using protein structure guided local tests (POINT)

West, R. M., Lu, W., Rotroff, D. M., Kuenemann, M. A., Chang, S-M., Wu, M. C., Wagner, M. J., Buse, J. B., Motsinger-Reif, A. A., Fourches, D. & Tzeng, J. Y., 2019 Feb 1, In : PLoS Computational Biology. 15, 2, e1006722.

Research output: Contribution to journalArticle

Open Access
Protein Structure
protein structure
Aggregation
Agglomeration
Kernel Machines

Income, costs, and health care utilization may influence surgical choice in early stage breast cancer

Sweeting, R. S., Du, L., Shyr, Y. & Hooks, M. A., 2019 Mar 1, In : Breast Journal. 25, 2, p. 334-337 4 p.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)
Tie
Social Networks
Feature Modeling
Mobile devices
Energy conservation

Linear profiles monitoring in the presence of nonnormal random errors

Li, C-I. & Tsai, T. R., 2019 Jan 1, In : Quality and Reliability Engineering International.

Research output: Contribution to journalArticle

Random errors
Normal distribution
Monitoring
Quality control
Masks

Marine: Multi-relational network embeddings with relational proximity and node attributes

Feng, M. H., Hsu, C. C., Li, C-T., Yeh, M. Y. & Lin, S. D., 2019 May 13, The Web Conference 2019 - Proceedings of the World Wide Web Conference, WWW 2019. Association for Computing Machinery, Inc, p. 470-479 10 p. (The Web Conference 2019 - Proceedings of the World Wide Web Conference, WWW 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Labels
Experiments

Mentor-spotting: recommending expert mentors to mentees for live trouble-shooting in Codementor

Li, C-T., 2019 Jan 1, (Accepted/In press) In : Knowledge and Information Systems. 61, 2, p. 799-820 22 p.

Research output: Contribution to journalArticle

Supervised learning
Innovation
Availability

Modeling financial interval time series

Lin, L-C. & Sun, L. H., 2019 Feb 1, In : PloS one. 14, 2, e0211709.

Research output: Contribution to journalArticle

Open Access
Time series
time series analysis
Likelihood Functions
Volatilization
financial economics
3 Citations (Scopus)

Molecular damage and responses of oral keratinocyte to hydrogen peroxide

Lin, K. Y., Chung, C. H., Ciou, J. S., Su, P-F., Wang, P. W., Shieh, D-B. & Wang, T. C., 2019 Jan 11, In : BMC Oral Health. 19, 1, 10.

Research output: Contribution to journalArticle

Keratinocytes
Hydrogen Peroxide
Dentin Sensitivity
Tooth Bleaching
Comet Assay
1 Citation (Scopus)

Monitoring nonlinear profile data using support vector regression method

Li, C-I., Pan, J-N. & Liao, C. H., 2019 Feb 1, In : Quality and Reliability Engineering International. 35, 1, p. 127-135 9 p.

Research output: Contribution to journalArticle

Monitoring
Normal distribution
Control charts
Regression method
Support vector regression

Optimal Noncollapsing Space-Filling Designs for Irregular Experimental Regions

Chen, R-B., Li, C. H., Hung, Y. & Wang, W., 2019 Jan 2, In : Journal of Computational and Graphical Statistics. 28, 1, p. 74-91 18 p.

Research output: Contribution to journalArticle

Discrete Optimization
Constrained Optimization Problem
Particle Swarm Optimization
Irregular
Thermal Management

Palliative Care Referrals for Advanced Non–small-cell Lung Cancer (NSCLC): Patient and Provider Attitudes and Practices

Feld, E., Singhi, E. K., Phillips, S., Huang, L. C., Shyr, Y. & Horn, L., 2019 May 1, In : Clinical Lung Cancer. 20, 3, p. e291-e298

Research output: Contribution to journalArticle

Palliative Care
Non-Small Cell Lung Carcinoma
Referral and Consultation

Predictors of caregiver burden and care costs for older persons with dementia in Taiwan

Ku, L-J. E., Chang, S-M., Pai, M-C. & Hsieh, H. M., 2019 Jun 1, In : International Psychogeriatrics. 31, 6, p. 885-894 10 p.

Research output: Contribution to journalArticle

Taiwan
Caregivers
Dementia
Costs and Cost Analysis
Interviews
Open Access
Fertilization in Vitro
Pregnancy Outcome
Longitudinal Studies
Cohort Studies
Quality of Life

Semiparametric additive rates model for recurrent events data with intermittent gaps

Su, P-F., Zhong, J. & Ou, H-T., 2019 Apr 15, In : Statistics in Medicine. 38, 8, p. 1343-1356 14 p.

Research output: Contribution to journalArticle

Recurrent Events
National Health Programs
Biased Estimation
Taiwan
Hypoglycemia

Sparse-Group Independent Component Analysis with application to yield curves prediction

Chen, Y., Niu, L., Chen, R-B. & He, Q., 2019 May 1, In : Computational Statistics and Data Analysis. 133, p. 76-89 14 p.

Research output: Contribution to journalArticle

Independent component analysis
Independent Component Analysis
Curve
Prediction
Estimator
1 Citation (Scopus)

Systems Biology Analyses Show Hyperactivation of Transforming Growth Factor-β and JNK Signaling Pathways in Esophageal Cancer

Blum, A. E., Venkitachalam, S., Ravillah, D., Chelluboyina, A. K., Kieber-Emmons, A. M., Ravi, L., Kresak, A., Chandar, A. K., Markowitz, S. D., Canto, M. I., Wang, J. S., Shaheen, N. J., Guo, Y., Shyr, Y., Willis, J. E., Chak, A., Varadan, V. & Guda, K., 2019 May 1, In : Gastroenterology. 156, 6, p. 1761-1774 14 p.

Research output: Contribution to journalArticle

Systems Biology
Transforming Growth Factors
Esophageal Neoplasms
Adenocarcinoma
Phosphotransferases

Temporal popularity prediction of locations for geographical placement of retail stores

Hsieh, H-P., Lin, F., Li, C-T., Yen, I. E. H. & Chen, H. Y., 2019 Jul 1, In : Knowledge and Information Systems. 60, 1, p. 247-273 27 p.

Research output: Contribution to journalArticle

Retail stores
Supervised learning
Profitability
Interpolation
1 Citation (Scopus)

Towards a more reliable privacy-preserving recommender system

Jiang, J. Y., Li, C-T. & Lin, S. D., 2019 May 1, In : Information sciences. 482, p. 248-265 18 p.

Research output: Contribution to journalArticle

Collaborative filtering
Privacy Preserving
Recommender Systems
Recommender systems
Privacy

Who should I invite: predicting event participants for a host user

Jiang, J. Y. & Li, C-T., 2019 Jun 4, In : Knowledge and Information Systems. 59, 3, p. 629-650 22 p.

Research output: Contribution to journalArticle

Factorization
Internet
Costs
Experiments
2018

A check-in shielding scheme against acquaintance inference in location-based social networks

Chen, B. H., Li, C-T. & Chuang, K-T., 2018 Jan 1, (Accepted/In press) In : World Wide Web.

Research output: Contribution to journalArticle

Shielding
Experiments
Partial Least Squares Regression
Recommender systems
Recommendations
Recommender Systems
Factorization
4 Citations (Scopus)

An ensemble of retrieval-based and generation-based human-computer conversation systems

Song, Y., Li, C-T., Nie, J. Y., Zhang, M., Zhao, D. & Yan, R., 2018 Jan 1, Proceedings of the 27th International Joint Conference on Artificial Intelligence, IJCAI 2018. Lang, J. (ed.). International Joint Conferences on Artificial Intelligence, p. 4382-4388 7 p. (IJCAI International Joint Conference on Artificial Intelligence; vol. 2018-July).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computer systems
Neural networks
Processing
2 Citations (Scopus)

An instantaneous spatiotemporal model for predicting traffic-related ultrafine particle concentration through mobile noise measurements

Lin, M-Y., Guo, Y. X., Chen, Y. C., Chen, W. T., Young, L. H., Lee, K-J., Wu, Z. Y. & Tsai, P-C., 2018 Sep 15, In : Science of the Total Environment. 636, p. 1139-1148 10 p.

Research output: Contribution to journalArticle

cardiovascular disease
temporal variation
spatial variation
Health
Acoustic waves

A Powerful Test for SNP Effects on Multivariate Binary Outcomes Using Kernel Machine Regression

Davenport, C. A., Maity, A., Sullivan, P. F. & Tzeng, J-Y., 2018 Apr 1, In : Statistics in Biosciences. 10, 1, p. 117-138 22 p.

Research output: Contribution to journalArticle

Kernel Machines
Binary Outcomes
Single Nucleotide Polymorphism
Regression
Polymorphism
7 Citations (Scopus)

Bioinformatic analysis of endogenous and exogenous small RNAs on lipoproteins

Allen, R. M., Zhao, S., Ramirez Solano, M. A., Zhu, W., Michell, D. L., Wang, Y., Shyr, Y., Sethupathy, P., Linton, M. F., Graf, G. A., Sheng, Q. & Vickers, K. C., 2018 Jan 1, In : Journal of Extracellular Vesicles. 7, 1, 1506198.

Research output: Contribution to journalArticle

Open Access
Computational Biology
Lipoproteins
Genome
RNA
MicroRNAs
5 Citations (Scopus)

Cadmium exposure increases the risk of juvenile obesity: a human and zebrafish comparative study

Green, A. J., Hoyo, C., Mattingly, C. J., Luo, Y., Tzeng, J-Y., Murphy, S. K., Buchwalter, D. B. & Planchart, A., 2018 Jul 1, In : International Journal of Obesity. 42, 7, p. 1285-1295 11 p.

Research output: Contribution to journalArticle

Zebrafish
Cadmium
Obesity
Heavy Metals
Epigenomics
1 Citation (Scopus)

Control charts based on quasi-likelihood estimation for monitoring profiles

Li, C-I., 2018 Feb 11, In : Journal of Statistical Computation and Simulation. 88, 3, p. 457-470 14 p.

Research output: Contribution to journalArticle

Quasi-likelihood
Control Charts
Monitoring
Exponentially Weighted Moving Average
Functional Relationship

Critical Fault-Detecting Time Evaluation in Software with Discrete Compound Poisson Models

Jeng, S-L., 2018 Dec 13, The 3rd Pacific Rim Statistical Conference for Production Engineering. Hsin-Chu, Taiwan

Research output: Chapter in Book/Report/Conference proceedingConference contribution