Research Output 1991 2020

2020

Long non-coding RNA 2310069B03Rik functions as a suppressor of Ucp1 expression under prolonged cold exposure in murine beige adipocytes

Iwase, M., Sakai, S., Seno, S., Yeh, Y. S., Kuo, T., Takahashi, H., Nomura, W., Jheng, H. F., Horton, P., Osato, N., Matsuda, H., Inoue, K., Kawada, T. & Goto, T., 2020 Feb 1, In : Bioscience, Biotechnology and Biochemistry. 84, 2, p. 305-313 9 p.

Research output: Contribution to journalArticle

Long Noncoding RNA
White Adipose Tissue
Tissue
Groin
Adipocytes
2019

Accelerated Segmented Diffusion-Weighted Prostate Imaging for Higher Resolution, Higher Geometric Fidelity, and Multi-b Perfusion Estimation

Aksit Ciris, P., Chiou, J. Y. G., Glazer, D. I., Chao, T. C., Tempany-Afdhal, C. M., Madore, B. & Maier, S. E., 2019 Apr 1, In : Investigative radiology. 54, 4, p. 238-246 9 p.

Research output: Contribution to journalArticle

Prostate
Perfusion
Echo-Planar Imaging
Diffusion Magnetic Resonance Imaging
Magnetic Resonance Imaging

C-3PO: Click-sequence-aware deeP neural network (DNN)-based Pop-uPs recOmmendation: I know you’ll click

Huang, T. T. H. D. & Kao, H. Y., 2019 Nov 1, In : Soft Computing. 23, 22, p. 11793-11799 7 p.

Research output: Contribution to journalArticle

Application programs
Recommendations
Neural Networks
Collaborative filtering
Recommender systems

Development of a human-computer collaborative sleep scoring system for polysomnography recordings

Liang, S. F., Shih, Y. H., Chen, P. Y. & Kuo, C. E., 2019 Jan 1, In : PloS one. 14, 7, e0218948.

Research output: Contribution to journalArticle

Open Access
human development
Polysomnography
Human Development
sleep
Sleep

Development of a rule-based automatic five-sleep-stage scoring method for rats

Wei, T. Y., Young, C. P., Liu, Y. T., Xu, J. H., Liang, S. F., Shaw, F. Z. & Kuo, C. E., 2019 Sep 4, In : Biomedical engineering online. 18, 1, 92.

Research output: Contribution to journalArticle

Open Access
Sleep Stages
Rats
Sleep
Research Design
Hyperalgesia

Estimating genome-wide off-target effects for pyrrole-imidazole polyamide binding by a pathway-based expression profiling approach

Lin, J., Krishnamurthy, S., Yoda, H., Shinozaki, Y., Watanabe, T., Koshikawa, N., Takatori, A., Horton, P. & Nagase, H., 2019 Apr, In : PloS one. 14, 4, e0215247.

Research output: Contribution to journalArticle

Open Access
pyrroles
Pyrroles
imidazoles
Nylons
Genes
1 Citation (Scopus)

Evolutionary-fuzzy-integral-based convolutional neural networks for facial image classification

Lin, C. J., Lin, C. H., Sun, C. C. & Wang, S. H., 2019 Sep, In : Electronics (Switzerland). 8, 9, 997.

Research output: Contribution to journalArticle

Open Access
Image classification
Neural networks
Network architecture
Particle swarm optimization (PSO)
Artificial intelligence
2 Citations (Scopus)

Multiple Convolutional Neural Networks fusion using improved fuzzy integral for facial emotion recognition

Lin, C. J., Lin, C. H., Wang, S-H. & Wu, C. H., 2019 Jul 1, In : Applied Sciences (Switzerland). 9, 13, 2593.

Research output: Contribution to journalArticle

Open Access
emotions
Fusion reactions
fusion
Neural networks
Particle swarm optimization (PSO)

The tent-type clean unit system platform for air cleaning and non-contact sleep assessment

Hsieh, T. H., Liu, Y. S., Liang, S. F., Yasutake, M. & Ishibashi, A., 2019 Oct 17, Proceedings of 2019 3rd International Conference on Computational Biology and Bioinformatics, ICCBB 2019. Association for Computing Machinery, p. 47-51 5 p. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cleaning
Air
Air quality
Radiation counters
Sleep

Using convolutional neural networks for character verification on integrated circuit components of printed circuit boards

Lin, C. H., Wang, S. H. & Lin, C. J., 2019 Nov 1, In : Applied Intelligence. 49, 11, p. 4022-4032 11 p.

Research output: Contribution to journalArticle

Image classification
Printed circuit boards
Integrated circuits
Inspection
Neural networks
2018

A bioinformatics potpourri

Schönbach, C., Li, J., Ma, L., Horton, P., Sjaugi, M. F. & Ranganathan, S., 2018 Jan 19, In : BMC genomics. 19, 920.

Research output: Contribution to journalEditorial

Computational Biology
Genomics
Metagenomics
Posters
Precision Medicine
2 Citations (Scopus)

EAGLE: Explicit Alternative Genome Likelihood Evaluator

Kuo, T., Frith, M. C., Sese, J. & Horton, P., 2018 Apr 20, In : BMC Medical Genomics. 11, 28.

Research output: Contribution to journalArticle

Genome
Benchmarking
Uncertainty
Exome
Eagles
1 Citation (Scopus)

Interval type-2 neural fuzzy controller-based navigation of cooperative load-carrying mobile robots in unknown environments

Lin, C. H., Wang, S-H. & Lin, C. J., 2018 Dec 1, In : Sensors (Switzerland). 18, 12, 4181.

Research output: Contribution to journalArticle

navigation
robots
Mobile robots
controllers
Navigation
Frequency bands
1 Citation (Scopus)

Using eye movement data and visit contexts to understand the experience of museum visitors

Tseng, Y. C., Tang, A. H., Shih, Y. H. & Liang, S. F., 2018 Apr 20, CHI 2018 - Extended Abstracts of the 2018 CHI Conference on Human Factors in Computing Systems: Engage with CHI. Association for Computing Machinery, LBW598. (Conference on Human Factors in Computing Systems - Proceedings; vol. 2018-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Eye movements
Museums
Data storage equipment
Glass
2017
1 Citation (Scopus)

De-aliasing for signal restoration in Propeller MR imaging

Chiu, S. C., Chang, H. C., Chu, M. L., Wu, M. L., Chung, H. W. & Lin, Y. R., 2017 Feb 1, In : Magnetic Resonance Imaging. 36, p. 12-15 4 p.

Research output: Contribution to journalArticle

Propellers
Computer Simulation
Artifacts
Restoration
Imaging Phantoms
15 Citations (Scopus)

Development and Evaluation of a Wearable Device for Sleep Quality Assessment

Kuo, C. E., Liu, Y. C., Chang, D. W., Young, C. P., Shaw, F. Z. & Liang, S. F., 2017 Jul, In : IEEE Transactions on Biomedical Engineering. 64, 7, p. 1547-1557 11 p., 7575654.

Research output: Contribution to journalArticle

Sleep
Data reduction
Screening
Sampling
Testing
20 Citations (Scopus)

Extensive cargo identification reveals distinct biological roles of the 12 importin pathways

Kimura, M., Morinaka, Y., Imai, K., Kose, S., Horton, P. & Imamoto, N., 2017 Jan 24, In : eLife. 6, e21184.

Research output: Contribution to journalArticle

Karyopherins
Proteins
Isotope Labeling
Biological Phenomena
Cell Nucleus Active Transport
5 Citations (Scopus)

Fast diffusion imaging with high angular resolution

Chao, T. C., Chiou, J. Y. G., Maier, S. E. & Madore, B., 2017 Feb 1, In : Magnetic Resonance in Medicine. 77, 2, p. 696-706 11 p.

Research output: Contribution to journalArticle

Echo-Planar Imaging
Brain
Clinical Protocols
Volunteers
Research
1 Citation (Scopus)

Free-breathing black-blood CINE fast-spin echo imaging for measuring abdominal aortic wall distensibility: A feasibility study

Lin, J. M., Patterson, A. J., Chao, T. C., Zhu, C., Chang, H. C., Mendes, J., Chung, H. W., Gillard, J. H. & Graves, M. J., 2017 Apr 13, In : Physics in Medicine and Biology. 62, 10, p. N204-N218

Research output: Contribution to journalArticle

Feasibility Studies
Abdominal Wall
Respiration
Magnetic Resonance Imaging
Abdominal Aorta
7 Citations (Scopus)

High-precision bicycle detection on single side-view image based on the geometric relationship

Lin, Y. B. & Young, C. P., 2017 Mar 1, In : Pattern Recognition. 63, p. 334-354 21 p.

Research output: Contribution to journalArticle

Bicycles
Wheels
Detectors
7 Citations (Scopus)

Portable wireless neurofeedback system of EEG alpha rhythm enhances memory

Wei, T. Y., Chang, D. W., Liu, Y. D., Liu, C. W., Young, C. P., Liang, S. F. & Shaw, F. Z., 2017 Nov 13, In : Biomedical engineering online. 16, 1, 128.

Research output: Contribution to journalArticle

Neurofeedback
Alpha Rhythm
Bioelectric potentials
Electroencephalography
Data storage equipment
1 Citation (Scopus)
pulleys
Pulleys
hypodermis
flexors
Ultrasonics
2 Citations (Scopus)

Ten simple rules for forming a scientific professional society

Gaëta, B. A., De Las Rivas, J., Horton, P., Meysman, P., Mulder, N., Romano, P. & Welch, L., 2017 Mar, In : PLoS Computational Biology. 13, 3, e1005226.

Research output: Contribution to journalEditorial

1 Citation (Scopus)

Topic suggestion by Bayesian network enhanced tag inference in community question answering

Tumenbayar, G. & Kao, H-Y., 2017 Mar 16, TAAI 2016 - 2016 Conference on Technologies and Applications of Artificial Intelligence, Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 178-185 8 p. 7880110. (TAAI 2016 - 2016 Conference on Technologies and Applications of Artificial Intelligence, Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Question Answering
Bayesian networks
Bayesian Networks
Engineering technology
Path
2016

A fast bicycle detector based on a geometric model for single side-view image

Young, C. P., Lin, Y. B. & Chen, K. Y., 2016 Aug 29, Proceedings of 2016 SAI Computing Conference, SAI 2016. Institute of Electrical and Electronics Engineers Inc., p. 349-353 5 p. 7556005. (Proceedings of 2016 SAI Computing Conference, SAI 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Bicycles
Geometric Model
Triangle
Safety
Detector

An implementation of spatial algorithm to estimate the focus map from a single image

Lin, Y. B. & Young, C. P., 2016 Aug 23, 2016 IEEE/ACIS 15th International Conference on Computer and Information Science, ICIS 2016 - Proceedings. Uehara, K. & Nakamura, M. (eds.). Institute of Electrical and Electronics Engineers Inc., 7550785. (2016 IEEE/ACIS 15th International Conference on Computer and Information Science, ICIS 2016 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pixel
Pixels
Estimate
Frequency Domain
Image Processing
12 Citations (Scopus)

Combination of expert knowledge and a genetic fuzzy inference system for automatic sleep staging

Liang, S. F., Kuo, C. E., Shaw, F. Z., Chen, Y. H., Hsu, C. H. & Chen, J. Y., 2016 Oct, In : IEEE Transactions on Biomedical Engineering. 63, 10, 7360911.

Research output: Contribution to journalArticle

Fuzzy inference
Fuzzy rules
Fuzzy systems
Fuzzy sets
Electroencephalography

Cross-Sectional Nakagami Images in Passive Stretches Reveal Damage of Injured Muscles

Lin, S. P., Lin, Y. H., Fan, S. C., Huang, B. M., Lin, W. Y., Wang, S. H., Shung, K. K., Su, F. C. & Wu, C. C., 2016 Jan 1, In : BioMed research international. 2016, 6893712.

Research output: Contribution to journalArticle

Muscle
Muscles
Muscle Stretching Exercises
Ultrasonics
Ultrasonography

Development of an automatic sleep-wake staging method for rats

Wei, T. Y. & Young, C. P., 2016 Aug 4, 2016 IEEE International Symposium on Medical Measurements and Applications, MeMeA 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7533742. (2016 IEEE International Symposium on Medical Measurements and Applications, MeMeA 2016 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

sleep
scoring
wakes
rats
Rats
11 Citations (Scopus)

Dual-pathway multi-echo sequence for simultaneous frequency and T2 mapping

Cheng, C. C., Mei, C. S., Duryea, J., Chung, H. W., Chao, T. C., Panych, L. P. & Madore, B., 2016 Apr 1, In : Journal of Magnetic Resonance. 265, p. 177-187 11 p.

Research output: Contribution to journalArticle

Thermometry
Volunteers
Knee
echoes
Linear Models
3 Citations (Scopus)

Identification of binding targets of a pyrrole-imidazole polyamide KR12 in the LS180 colorectal cancer genome

Lin, J., Hiraoka, K., Watanabe, T., Kuo, T., Shinozaki, Y., Takatori, A., Koshikawa, N., Chandran, A., Otsuki, J., Sugiyama, H., Horton, P. & Nagase, H., 2016 Oct, In : PloS one. 11, 10, e0165581.

Research output: Contribution to journalArticle

pyrroles
Pyrroles
imidazoles
Nylons
colorectal neoplasms

Identification of item features in microblogging data

Huang, S. T., Li, P. S. & Kao, H-Y., 2016 Feb 12, TAAI 2015 - 2015 Conference on Technologies and Applications of Artificial Intelligence. Institute of Electrical and Electronics Engineers Inc., p. 396-403 8 p. 7407082. (TAAI 2015 - 2015 Conference on Technologies and Applications of Artificial Intelligence).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Experiments
4 Citations (Scopus)

Identification of the Position and Thickness of the First Annular Pulley in Sonographic Images

Yang, T-H., Lin, Y. H., Chuang, B. I., Chen, H. C., Lin, W. J., Yang, D. S., Wang, S-H., Sun, Y-N., Jou, I. M., Kuo, L-C. & Su, F., 2016 May 1, In : Ultrasound in Medicine and Biology. 42, 5, p. 1075-1083 9 p.

Research output: Contribution to journalArticle

pulleys
Ultrasonography
scanners
Research
Synovial Fluid

IFound: An object locator platform based on the radio transmission for IoT application

Young, C. P., Lin, Y. B. & Chen, K. Y., 2016 Jul 25, 2016 IEEE International Conference on Consumer Electronics-Taiwan, ICCE-TW 2016. Institute of Electrical and Electronics Engineers Inc., 7520960. (2016 IEEE International Conference on Consumer Electronics-Taiwan, ICCE-TW 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Radio transmission
Electric power utilization
Internet of things
15 Citations (Scopus)

Rapid amygdala kindling causes motor seizure and comorbidity of anxiety- and depression-like behaviors in rats

Chen, S. D., Wang, Y. L., Liang, S. F. & Shaw, F. Z., 2016 Jun 22, In : Frontiers in Behavioral Neuroscience. 10, Jun, 129.

Research output: Contribution to journalArticle

Amygdala
Comorbidity
Seizures
Anxiety
Depression
5 Citations (Scopus)

Role of Excessive Autophagy Induced by Mechanical Overload in Vein Graft Neointima Formation: Prediction and Prevention

Chang, Y. J., Huang, H. C., Hsueh, Y. Y., Wang, S. W., Su, F. C., Chang, C. H., Tang, M. J., Li, Y. S., Wang, S. H., Shung, K. K., Chien, S. & Wu, C. C., 2016 Feb 26, In : Scientific reports. 6, 22147.

Research output: Contribution to journalArticle

Neointima
Autophagy
Veins
Transplants
Ultrasonics
2015

1st Global Conference on Biomedical Engineering & 9th Asian-Pacific Conference on Medical and Biological Engineering: October 9–12, 2014, Tainan, Taiwan

Su, F., Wang, S-H. & Yeh, M-L., 2015 Jan 1, 1st Global Conference on Biomedical Engineering and 9th Asian-Pacific Conference on Medical and Biological Engineering. Wang, S-H., Su, F-C. & Yeh, M-L. (eds.). Springer Verlag, (IFMBE Proceedings; vol. 47).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biomedical engineering
Bioengineering
9 Citations (Scopus)

A novel mitosomal β-barrel outer membrane protein in Entamoeba

Santos, H. J., Imai, K., Makiuchi, T., Tomii, K., Horton, P., Nozawa, A., Ibrahim, M., Tozawa, Y. & Nozaki, T., 2015, In : Scientific reports. 5, 8545.

Research output: Contribution to journalArticle

Entamoeba
Membrane Proteins
Endopeptidase K
Entamoeba histolytica
Membranes
4 Citations (Scopus)

Curatable Named-Entity Recognition Using Semantic Relations

Hsu, Y. Y. & Kao, H-Y., 2015 Jul 1, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 12, 4, p. 785-792 8 p., 6945344.

Research output: Contribution to journalArticle

Named Entity Recognition
Semantics
Toxicogenetics
Genes
Databases
6 Citations (Scopus)

Edge types vs privacy in K-anonymization of shortest paths

Tsai, Y. C., Wang, S. L., Kao, H. Y. & Hong, T. P., 2015 Jun 1, In : Applied Soft Computing Journal. 31, p. 348-359 12 p.

Research output: Contribution to journalArticle

Experiments
1 Citation (Scopus)

Effect of low-intensity ultrasound on mortality of PC12 induced by amyloid β25-35

Chiu, C. Y. & Wang, S-H., 2015 Jan 1, In : Journal of Medical and Biological Engineering. 35, 3, p. 323-330 8 p.

Research output: Contribution to journalArticle

PC12 Cells
Amyloid
Ultrasonics
Mortality
Cell death
1 Citation (Scopus)

Efficient imaging of midbrain nuclei using inverse double-echo steady-state acquisition

Wu, M. L., Chang, H. C., Chao, T. C. & Chen, N. K., 2015 Jul 1, In : Medical Physics. 42, 7, p. 4367-4374 8 p.

Research output: Contribution to journalArticle

Mesencephalon
Signal-To-Noise Ratio
Noise
Red Nucleus
Occipital Lobe

Extending [k1, k2] anonymization of shortest paths for social networks

Tsai, Y. C., Wang, S. L., Hong, T. P. & Kao, H-Y., 2015 Jan 1, Multidisciplinary Social Networks Research - 2nd International Conference, MISNC 2015, Proceedings. Wang, K., Uesugi, S., Wang, L., Okuhara, K. & Ting, I-H. (eds.). Springer Verlag, p. 187-199 13 p. (Communications in Computer and Information Science; vol. 540).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Shortest path
Social Networks
Privacy
Experiments
Random Noise

Factors affecting the statistical analysis of ultrasonic backscattering signals and imaging

Tsai, Y. T., Wu, J. J., Lin, Y. H. & Wang, S. H., 2015 Jan 1, 16th Nordic-Baltic Conference on Biomedical Engineering - 16. NBC and 10. MTD 2014 Joint Conferences. Persson, M. & Mindedal, H. (eds.). Springer Verlag, p. 113-116 4 p. (IFMBE Proceedings; vol. 48).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Backscattering
Statistical methods
Ultrasonics
Imaging techniques
Liver

GIW and InCoB, two premier bioinformatics conferences in Asia with a combined 40 years of history

Schönbach, C., Horton, P., Yiu, S. M., Tan, T. W. & Ranganathan, S., 2015 Jan 1, In : BMC genomics. 16, p. I1

Research output: Contribution to journalArticle

Computational Biology
History
Joints
Research
Posters

GIW and InCoB are advancing bioinformatics in the Asia-Pacific

Schönbach, C., Horton, P., Yiu, S. M., Tan, T. W. & Ranganathan, S., 2015 Dec 18, In : BMC Bioinformatics. 16, 18, I1.

Research output: Contribution to journalArticle

Informatics
Bioinformatics
Computational Biology
Genome
Genes

Guest Editorial for the 25th International Conference on Genome Informatics (GIW/ISCB-Asia 2014)

Shibuya, T., Tang, C. Y., Horton, P. & Asai, K., 2015 Jul 1, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 12, 4, p. 761-762 2 p., 7180484.

Research output: Contribution to journalEditorial

Informatics
Tokyo
Genomics
Genome
Genes
4 Citations (Scopus)

LDA based semi-supervised learning from streaming short text

Chen, J. D. & Kao, H-Y., 2015 Dec 2, Proceedings of the 2015 IEEE International Conference on Data Science and Advanced Analytics, DSAA 2015. Pasi, G., Kwok, J., Zaiane, O., Gallinari, P., Gaussier, E. & Cao, L. (eds.). Institute of Electrical and Electronics Engineers Inc., 7344830. (Proceedings of the 2015 IEEE International Conference on Data Science and Advanced Analytics, DSAA 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Supervised learning
Metadata
Semi-supervised learning
Twitter
Train
117 Citations (Scopus)

MitoFates: Improved prediction of mitochondrial targeting sequences and their cleavage sites

Fukasawa, Y., Tsuji, J., Fu, S. C., Tomii, K., Horton, P. & Imai, K., 2015 Apr 1, In : Molecular and Cellular Proteomics. 14, 4, p. 1113-1126 14 p.

Research output: Contribution to journalArticle

Mitochondria
Mitochondrial Proteins
Genes
Protein Isoforms
Position-Specific Scoring Matrices