Research Output

2020

Long non-coding RNA 2310069B03Rik functions as a suppressor of Ucp1 expression under prolonged cold exposure in murine beige adipocytes

Iwase, M., Sakai, S., Seno, S., Yeh, Y. S., Kuo, T., Takahashi, H., Nomura, W., Jheng, H. F., Horton, P., Osato, N., Matsuda, H., Inoue, K., Kawada, T. & Goto, T., 2020 Feb 1, In : Bioscience, Biotechnology and Biochemistry. 84, 2, p. 305-313 9 p.

Research output: Contribution to journalArticle

2019

Accelerated Segmented Diffusion-Weighted Prostate Imaging for Higher Resolution, Higher Geometric Fidelity, and Multi-b Perfusion Estimation

Aksit Ciris, P., Chiou, J. Y. G., Glazer, D. I., Chao, T. C., Tempany-Afdhal, C. M., Madore, B. & Maier, S. E., 2019 Apr 1, In : Investigative radiology. 54, 4, p. 238-246 9 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Development of a human-computer collaborative sleep scoring system for polysomnography recordings

Liang, S. F., Shih, Y. H., Chen, P. Y. & Kuo, C. E., 2019 Jan 1, In : PloS one. 14, 7, e0218948.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Development of a rule-based automatic five-sleep-stage scoring method for rats

Wei, T. Y., Young, C. P., Liu, Y. T., Xu, J. H., Liang, S. F., Shaw, F. Z. & Kuo, C. E., 2019 Sep 4, In : Biomedical engineering online. 18, 1, 92.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Estimating genome-wide off-target effects for pyrrole-imidazole polyamide binding by a pathway-based expression profiling approach

Lin, J., Krishnamurthy, S., Yoda, H., Shinozaki, Y., Watanabe, T., Koshikawa, N., Takatori, A., Horton, P. & Nagase, H., 2019 Apr, In : PloS one. 14, 4, e0215247.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Evolutionary-fuzzy-integral-based convolutional neural networks for facial image classification

Lin, C. J., Lin, C. H., Sun, C. C. & Wang, S. H., 2019 Sep, In : Electronics (Switzerland). 8, 9, 997.

Research output: Contribution to journalArticle

Open Access
2 Citations (Scopus)

Multiple Convolutional Neural Networks fusion using improved fuzzy integral for facial emotion recognition

Lin, C. J., Lin, C. H., Wang, S. H. & Wu, C. H., 2019 Jul 1, In : Applied Sciences (Switzerland). 9, 13, 2593.

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

Novel lineage-specific transmembrane β-barrel proteins in the endoplasmic reticulum of Entamoeba histolytica

Santos, H. J., Imai, K., Makiuchi, T., Tomii, K., Horton, P., Nozawa, A., Okada, K., Tozawa, Y. & Nozaki, T., 2019 Sep 1, In : FEBS Journal. 286, 17, p. 3416-3432 17 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

The tent-type clean unit system platform for air cleaning and non-contact sleep assessment

Hsieh, T. H., Liu, Y. S., Liang, S. F., Yasutake, M. & Ishibashi, A., 2019 Oct 17, Proceedings of 2019 3rd International Conference on Computational Biology and Bioinformatics, ICCBB 2019. Association for Computing Machinery, p. 47-51 5 p. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using convolutional neural networks for character verification on integrated circuit components of printed circuit boards

Lin, C. H., Wang, S. H. & Lin, C. J., 2019 Nov 1, In : Applied Intelligence. 49, 11, p. 4022-4032 11 p.

Research output: Contribution to journalArticle

2018

A bioinformatics potpourri

Schönbach, C., Li, J., Ma, L., Horton, P., Sjaugi, M. F. & Ranganathan, S., 2018 Jan 19, In : BMC genomics. 19, 920.

Research output: Contribution to journalEditorial

A fully integrated 16-channel closed-loop neural-prosthetic CMOS SoC with wireless power and bidirectional data telemetry for real-time efficient human epileptic seizure control

Cheng, C. H., Tsai, P. Y., Yang, T. Y., Cheng, W. H., Yen, T. Y., Luo, Z., Qian, X. H., Chen, Z. X., Lin, T. H., Chen, W. H., Chen, W. M., Liang, S. F., Shaw, F. Z., Chang, C. S., Hsin, Y. L., Lee, C. Y., Ker, M. D. & Wu, C. Y., 2018 Nov, In : IEEE Journal of Solid-State Circuits. 53, 11, p. 3314-3326 13 p., 8463542.

Research output: Contribution to journalArticle

8 Citations (Scopus)

EAGLE: Explicit Alternative Genome Likelihood Evaluator

Kuo, T., Frith, M. C., Sese, J. & Horton, P., 2018 Apr 20, In : BMC Medical Genomics. 11, 28.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Interval type-2 neural fuzzy controller-based navigation of cooperative load-carrying mobile robots in unknown environments

Lin, C. H., Wang, S-H. & Lin, C. J., 2018 Dec 1, In : Sensors (Switzerland). 18, 12, 4181.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Sequence homology in eukaryotes (SHOE): Interactive visual tool for promoter analysis 06 Biological Sciences 0604 Genetics

Polouliakh, N., Horton, P., Shibanai, K., Takata, K., Ludwig, V., Ghosh, S. & Kitano, H., 2018 Sep 27, In : BMC genomics. 19, 1, 715.

Research output: Contribution to journalArticle

Using eye movement data and visit contexts to understand the experience of museum visitors

Tseng, Y. C., Tang, A. H., Shih, Y. H. & Liang, S. F., 2018 Apr 20, CHI 2018 - Extended Abstracts of the 2018 CHI Conference on Human Factors in Computing Systems: Engage with CHI. Association for Computing Machinery, LBW598. (Conference on Human Factors in Computing Systems - Proceedings; vol. 2018-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)
2017

De-aliasing for signal restoration in Propeller MR imaging

Chiu, S. C., Chang, H. C., Chu, M. L., Wu, M. L., Chung, H. W. & Lin, Y. R., 2017 Feb 1, In : Magnetic Resonance Imaging. 36, p. 12-15 4 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Development and Evaluation of a Wearable Device for Sleep Quality Assessment

Kuo, C. E., Liu, Y. C., Chang, D. W., Young, C. P., Shaw, F. Z. & Liang, S. F., 2017 Jul, In : IEEE Transactions on Biomedical Engineering. 64, 7, p. 1547-1557 11 p., 7575654.

Research output: Contribution to journalArticle

19 Citations (Scopus)

Extensive cargo identification reveals distinct biological roles of the 12 importin pathways

Kimura, M., Morinaka, Y., Imai, K., Kose, S., Horton, P. & Imamoto, N., 2017 Jan 24, In : eLife. 6, e21184.

Research output: Contribution to journalArticle

27 Citations (Scopus)

Fast diffusion imaging with high angular resolution

Chao, T. C., Chiou, J. Y. G., Maier, S. E. & Madore, B., 2017 Feb 1, In : Magnetic Resonance in Medicine. 77, 2, p. 696-706 11 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Free-breathing black-blood CINE fast-spin echo imaging for measuring abdominal aortic wall distensibility: A feasibility study

Lin, J. M., Patterson, A. J., Chao, T. C., Zhu, C., Chang, H. C., Mendes, J., Chung, H. W., Gillard, J. H. & Graves, M. J., 2017 Apr 13, In : Physics in Medicine and Biology. 62, 10, p. N204-N218

Research output: Contribution to journalArticle

1 Citation (Scopus)

High-precision bicycle detection on single side-view image based on the geometric relationship

Lin, Y. B. & Young, C. P., 2017 Mar 1, In : Pattern Recognition. 63, p. 334-354 21 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Portable wireless neurofeedback system of EEG alpha rhythm enhances memory

Wei, T. Y., Chang, D. W., Liu, Y. D., Liu, C. W., Young, C. P., Liang, S. F. & Shaw, F. Z., 2017 Nov 13, In : Biomedical engineering online. 16, 1, 128.

Research output: Contribution to journalArticle

9 Citations (Scopus)
1 Citation (Scopus)

Ten simple rules for forming a scientific professional society

Gaëta, B. A., De Las Rivas, J., Horton, P., Meysman, P., Mulder, N., Romano, P. & Welch, L., 2017 Mar, In : PLoS Computational Biology. 13, 3, e1005226.

Research output: Contribution to journalEditorial

2 Citations (Scopus)

Topic suggestion by Bayesian network enhanced tag inference in community question answering

Tumenbayar, G. & Kao, H-Y., 2017 Mar 16, TAAI 2016 - 2016 Conference on Technologies and Applications of Artificial Intelligence, Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 178-185 8 p. 7880110. (TAAI 2016 - 2016 Conference on Technologies and Applications of Artificial Intelligence, Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)
2016

A commentary on evaluation of the evenness score in next-generation sequencing

Horton, P., 2016 Jul 1, In : Journal of Human Genetics. 61, 7, 1 p.

Research output: Contribution to journalComment/debate

A fast bicycle detector based on a geometric model for single side-view image

Young, C. P., Lin, Y. B. & Chen, K. Y., 2016 Aug 29, Proceedings of 2016 SAI Computing Conference, SAI 2016. Institute of Electrical and Electronics Engineers Inc., p. 349-353 5 p. 7556005. (Proceedings of 2016 SAI Computing Conference, SAI 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An implementation of spatial algorithm to estimate the focus map from a single image

Lin, Y. B. & Young, C. P., 2016 Aug 23, 2016 IEEE/ACIS 15th International Conference on Computer and Information Science, ICIS 2016 - Proceedings. Uehara, K. & Nakamura, M. (eds.). Institute of Electrical and Electronics Engineers Inc., 7550785. (2016 IEEE/ACIS 15th International Conference on Computer and Information Science, ICIS 2016 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Combination of expert knowledge and a genetic fuzzy inference system for automatic sleep staging

Liang, S. F., Kuo, C. E., Shaw, F. Z., Chen, Y. H., Hsu, C. H. & Chen, J. Y., 2016 Oct, In : IEEE Transactions on Biomedical Engineering. 63, 10, 7360911.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Cross-Sectional Nakagami Images in Passive Stretches Reveal Damage of Injured Muscles

Lin, S. P., Lin, Y. H., Fan, S. C., Huang, B. M., Lin, W. Y., Wang, S. H., Shung, K. K., Su, F. C. & Wu, C. C., 2016 Jan 1, In : BioMed research international. 2016, 6893712.

Research output: Contribution to journalArticle

Development of an automatic sleep-wake staging method for rats

Wei, T. Y. & Young, C. P., 2016 Aug 4, 2016 IEEE International Symposium on Medical Measurements and Applications, MeMeA 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7533742. (2016 IEEE International Symposium on Medical Measurements and Applications, MeMeA 2016 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Dual-pathway multi-echo sequence for simultaneous frequency and T2 mapping

Cheng, C. C., Mei, C. S., Duryea, J., Chung, H. W., Chao, T. C., Panych, L. P. & Madore, B., 2016 Apr 1, In : Journal of Magnetic Resonance. 265, p. 177-187 11 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Identification of binding targets of a pyrrole-imidazole polyamide KR12 in the LS180 colorectal cancer genome

Lin, J., Hiraoka, K., Watanabe, T., Kuo, T., Shinozaki, Y., Takatori, A., Koshikawa, N., Chandran, A., Otsuki, J., Sugiyama, H., Horton, P. & Nagase, H., 2016 Oct, In : PloS one. 11, 10, e0165581.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Identification of item features in microblogging data

Huang, S. T., Li, P. S. & Kao, H-Y., 2016 Feb 12, TAAI 2015 - 2015 Conference on Technologies and Applications of Artificial Intelligence. Institute of Electrical and Electronics Engineers Inc., p. 396-403 8 p. 7407082. (TAAI 2015 - 2015 Conference on Technologies and Applications of Artificial Intelligence).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Identification of the Position and Thickness of the First Annular Pulley in Sonographic Images

Yang, T. H., Lin, Y. H., Chuang, B. I., Chen, H. C., Lin, W. J., Yang, D. S., Wang, S. H., Sun, Y. N., Jou, I. M., Kuo, L. C. & Su, F. C., 2016 May 1, In : Ultrasound in Medicine and Biology. 42, 5, p. 1075-1083 9 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

IFound: An object locator platform based on the radio transmission for IoT application

Young, C. P., Lin, Y. B. & Chen, K. Y., 2016 Jul 25, 2016 IEEE International Conference on Consumer Electronics-Taiwan, ICCE-TW 2016. Institute of Electrical and Electronics Engineers Inc., 7520960. (2016 IEEE International Conference on Consumer Electronics-Taiwan, ICCE-TW 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rapid amygdala kindling causes motor seizure and comorbidity of anxiety- and depression-like behaviors in rats

Chen, S. D., Wang, Y. L., Liang, S. F. & Shaw, F. Z., 2016 Jun 22, In : Frontiers in Behavioral Neuroscience. 10, Jun, 129.

Research output: Contribution to journalArticle

15 Citations (Scopus)

Role of Excessive Autophagy Induced by Mechanical Overload in Vein Graft Neointima Formation: Prediction and Prevention

Chang, Y. J., Huang, H. C., Hsueh, Y. Y., Wang, S. W., Su, F. C., Chang, C. H., Tang, M. J., Li, Y. S., Wang, S. H., Shung, K. K., Chien, S. & Wu, C. C., 2016 Feb 26, In : Scientific reports. 6, 22147.

Research output: Contribution to journalArticle

5 Citations (Scopus)
2015

1st Global Conference on Biomedical Engineering & 9th Asian-Pacific Conference on Medical and Biological Engineering: October 9–12, 2014, Tainan, Taiwan

Su, F., Wang, S-H. & Yeh, M-L., 2015 Jan 1, 1st Global Conference on Biomedical Engineering and 9th Asian-Pacific Conference on Medical and Biological Engineering. Wang, S-H., Su, F-C. & Yeh, M-L. (eds.). Springer Verlag, (IFMBE Proceedings; vol. 47).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A novel mitosomal β-barrel outer membrane protein in Entamoeba

Santos, H. J., Imai, K., Makiuchi, T., Tomii, K., Horton, P., Nozawa, A., Ibrahim, M., Tozawa, Y. & Nozaki, T., 2015, In : Scientific reports. 5, 8545.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Curatable Named-Entity Recognition Using Semantic Relations

Hsu, Y. Y. & Kao, H-Y., 2015 Jul 1, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 12, 4, p. 785-792 8 p., 6945344.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Effect of low-intensity ultrasound on mortality of PC12 induced by amyloid β25-35

Chiu, C. Y. & Wang, S-H., 2015 Jan 1, In : Journal of Medical and Biological Engineering. 35, 3, p. 323-330 8 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Efficient imaging of midbrain nuclei using inverse double-echo steady-state acquisition

Wu, M. L., Chang, H. C., Chao, T. C. & Chen, N. K., 2015 Jul 1, In : Medical Physics. 42, 7, p. 4367-4374 8 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Evaluating the sleep quality using multiscale entropy analysis

Kuo, C. E., Liang, S. F., Shih, Y. H. & Shaw, F. Z., 2015 Jan 1, 1st Global Conference on Biomedical Engineering and 9th Asian-Pacific Conference on Medical and Biological Engineering. Su, F-C., Yeh, M-L. & Wang, S-H. (eds.). Springer Verlag, p. 166-169 4 p. (IFMBE Proceedings; vol. 47).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Extending [k1, k2] anonymization of shortest paths for social networks

Tsai, Y. C., Wang, S. L., Hong, T. P. & Kao, H-Y., 2015 Jan 1, Multidisciplinary Social Networks Research - 2nd International Conference, MISNC 2015, Proceedings. Wang, K., Uesugi, S., Wang, L., Okuhara, K. & Ting, I-H. (eds.). Springer Verlag, p. 187-199 13 p. (Communications in Computer and Information Science; vol. 540).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Factors affecting the statistical analysis of ultrasonic backscattering signals and imaging

Tsai, Y. T., Wu, J. J., Lin, Y. H. & Wang, S. H., 2015 Jan 1, 16th Nordic-Baltic Conference on Biomedical Engineering - 16. NBC and 10. MTD 2014 Joint Conferences. Persson, M. & Mindedal, H. (eds.). Springer Verlag, p. 113-116 4 p. (IFMBE Proceedings; vol. 48).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

GIW and InCoB, two premier bioinformatics conferences in Asia with a combined 40 years of history

Schönbach, C., Horton, P., Yiu, S. M., Tan, T. W. & Ranganathan, S., 2015 Jan 1, In : BMC genomics. 16, p. I1

Research output: Contribution to journalArticle

GIW and InCoB are advancing bioinformatics in the Asia-Pacific

Schönbach, C., Horton, P., Yiu, S. M., Tan, T. W. & Ranganathan, S., 2015 Dec 18, In : BMC Bioinformatics. 16, 18, I1.

Research output: Contribution to journalArticle