Research Output 1996 2019

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2019

Accelerated Segmented Diffusion-Weighted Prostate Imaging for Higher Resolution, Higher Geometric Fidelity, and Multi-b Perfusion Estimation

Aksit Ciris, P., Chiou, J. Y. G., Glazer, D. I., Chao, T-C., Tempany-Afdhal, C. M., Madore, B. & Maier, S. E., 2019 Apr 1, In : Investigative radiology. 54, 4, p. 238-246 9 p.

Research output: Contribution to journalArticle

Prostate
Perfusion
Echo-Planar Imaging
Diffusion Magnetic Resonance Imaging
Magnetic Resonance Imaging

C-3PO: Click-sequence-aware deeP neural network (DNN)-based Pop-uPs recOmmendation: I know you’ll click

Huang, T. T. H. D. & Kao, H. Y., 2019 Nov 1, In : Soft Computing. 23, 22, p. 11793-11799 7 p.

Research output: Contribution to journalArticle

Application programs
Recommendations
Neural Networks
Collaborative filtering
Recommender systems

Evolutionary-fuzzy-integral-based convolutional neural networks for facial image classification

Lin, C. J., Lin, C. H., Sun, C. C. & Wang, S. H., 2019 Sep, In : Electronics (Switzerland). 8, 9, 997.

Research output: Contribution to journalArticle

Open Access
Image classification
Neural networks
Network architecture
Particle swarm optimization (PSO)
Artificial intelligence

Multiple Convolutional Neural Networks fusion using improved fuzzy integral for facial emotion recognition

Lin, C. J., Lin, C. H., Wang, S-H. & Wu, C. H., 2019 Jul 1, In : Applied Sciences (Switzerland). 9, 13, 2593.

Research output: Contribution to journalArticle

Open Access
emotions
Fusion reactions
fusion
Neural networks
Particle swarm optimization (PSO)

Using convolutional neural networks for character verification on integrated circuit components of printed circuit boards

Lin, C. H., Wang, S. H. & Lin, C. J., 2019 Nov 1, In : Applied Intelligence. 49, 11, p. 4022-4032 11 p.

Research output: Contribution to journalArticle

Image classification
Printed circuit boards
Integrated circuits
Inspection
Neural networks
2018
1 Citation (Scopus)

Interval type-2 neural fuzzy controller-based navigation of cooperative load-carrying mobile robots in unknown environments

Lin, C. H., Wang, S-H. & Lin, C. J., 2018 Dec 1, In : Sensors (Switzerland). 18, 12, 4181.

Research output: Contribution to journalArticle

navigation
robots
Mobile robots
controllers
Navigation
2017
1 Citation (Scopus)

De-aliasing for signal restoration in Propeller MR imaging

Chiu, S. C., Chang, H. C., Chu, M. L., Wu, M-L., Chung, H. W. & Lin, Y. R., 2017 Feb 1, In : Magnetic Resonance Imaging. 36, p. 12-15 4 p.

Research output: Contribution to journalArticle

Propellers
Computer Simulation
Artifacts
Restoration
Imaging Phantoms
5 Citations (Scopus)

Fast diffusion imaging with high angular resolution

Chao, T. C., Chiou, J. Y. G., Maier, S. E. & Madore, B., 2017 Feb 1, In : Magnetic Resonance in Medicine. 77, 2, p. 696-706 11 p.

Research output: Contribution to journalArticle

Echo-Planar Imaging
Brain
Clinical Protocols
Volunteers
Research
1 Citation (Scopus)

Free-breathing black-blood CINE fast-spin echo imaging for measuring abdominal aortic wall distensibility: A feasibility study

Lin, J. M., Patterson, A. J., Chao, T. C., Zhu, C., Chang, H. C., Mendes, J., Chung, H. W., Gillard, J. H. & Graves, M. J., 2017 Apr 13, In : Physics in Medicine and Biology. 62, 10, p. N204-N218

Research output: Contribution to journalArticle

Feasibility Studies
Abdominal Wall
Respiration
Magnetic Resonance Imaging
Abdominal Aorta
3 Citations (Scopus)

k- -anonymization of multiple shortest paths

Wang, S. L., Tsai, Y. C., Hong, T. P. & Kao, H-Y., 2017 Aug 1, In : Soft Computing. 21, 15, p. 4215-4226 12 p.

Research output: Contribution to journalArticle

Shortest path
Privacy
Path Length
Experiments
Path
1 Citation (Scopus)

Quantitative assessment of first annular pulley and adjacent tissues using high-frequency ultrasound

Lin, Y. H., Yang, T-H., Wang, S-H. & Su, F., 2017 Jan 7, In : Sensors (Switzerland). 17, 1, 107.

Research output: Contribution to journalArticle

pulleys
Pulleys
hypodermis
flexors
Ultrasonics
3 Citations (Scopus)

Word co-occurrence augmented topic model in short text

Chen, G. B. & Kao, H-Y., 2017 Jan 1, In : Intelligent Data Analysis. 21, S1, p. S55-S70

Research output: Contribution to journalArticle

Model
Text
Internet
Experimental Results
Term
2016
6 Citations (Scopus)

AuDis: an automatic CRF-enhanced disease normalization in biomedical text

Lee, H. C., Hsu, Y. Y. & Kao, H-Y., 2016 Jan 1, In : Database : the journal of biological databases and curation. 2016

Research output: Contribution to journalArticle

biomedical research
health services
Knowledge Bases
PubMed
Biomedical Research

Cross-Sectional Nakagami Images in Passive Stretches Reveal Damage of Injured Muscles

Lin, S. P., Lin, Y. H., Fan, S. C., Huang, B-M., Lin, W. Y., Wang, S-H., Shung, K. K., Su, F. & Wu, C-C., 2016 Jan 1, In : BioMed research international. 2016, 6893712.

Research output: Contribution to journalArticle

Muscle
Muscles
Muscle Stretching Exercises
Ultrasonics
Ultrasonography
11 Citations (Scopus)

Dual-pathway multi-echo sequence for simultaneous frequency and T 2 mapping

Cheng, C. C., Mei, C. S., Duryea, J., Chung, H. W., Chao, T-C., Panych, L. P. & Madore, B., 2016 Apr 1, In : Journal of Magnetic Resonance. 265, p. 177-187 11 p.

Research output: Contribution to journalArticle

Thermometry
Volunteers
Knee
echoes
Linear Models
4 Citations (Scopus)

Identification of the Position and Thickness of the First Annular Pulley in Sonographic Images

Yang, T-H., Lin, Y. H., Chuang, B. I., Chen, H. C., Lin, W. J., Yang, D. S., Wang, S-H., Sun, Y-N., Jou, I. M., Kuo, L-C. & Su, F., 2016 May 1, In : Ultrasound in Medicine and Biology. 42, 5, p. 1075-1083 9 p.

Research output: Contribution to journalArticle

pulleys
Ultrasonography
scanners
Research
Synovial Fluid
5 Citations (Scopus)

Role of Excessive Autophagy Induced by Mechanical Overload in Vein Graft Neointima Formation: Prediction and Prevention

Chang, Y. J., Huang, H. C., Hsueh, Y. Y., Wang, S. W., Su, F. C., Chang, C. H., Tang, M. J., Li, Y. S., Wang, S. H., Shung, K. K., Chien, S. & Wu, C. C., 2016 Feb 26, In : Scientific reports. 6, 22147.

Research output: Contribution to journalArticle

Neointima
Autophagy
Veins
Transplants
Ultrasonics
2015
4 Citations (Scopus)

Curatable Named-Entity Recognition Using Semantic Relations

Hsu, Y. Y. & Kao, H-Y., 2015 Jul 1, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 12, 4, p. 785-792 8 p., 6945344.

Research output: Contribution to journalArticle

Named Entity Recognition
Semantics
Toxicogenetics
Genes
Databases
6 Citations (Scopus)

Edge types vs privacy in K-anonymization of shortest paths

Tsai, Y. C., Wang, S. L., Kao, H. Y. & Hong, T. P., 2015 Jun 1, In : Applied Soft Computing Journal. 31, p. 348-359 12 p.

Research output: Contribution to journalArticle

Experiments
1 Citation (Scopus)

Effect of low-intensity ultrasound on mortality of PC12 induced by amyloid β25-35

Chiu, C. Y. & Wang, S-H., 2015 Jan 1, In : Journal of Medical and Biological Engineering. 35, 3, p. 323-330 8 p.

Research output: Contribution to journalArticle

PC12 Cells
Amyloid
Ultrasonics
Mortality
Cell death
1 Citation (Scopus)

Efficient imaging of midbrain nuclei using inverse double-echo steady-state acquisition

Wu, M-L., Chang, H. C., Chao, T-C. & Chen, N. K., 2015 Jul 1, In : Medical Physics. 42, 7, p. 4367-4374 8 p.

Research output: Contribution to journalArticle

Mesencephalon
Signal-To-Noise Ratio
Noise
Red Nucleus
Occipital Lobe
54 Citations (Scopus)

GNormPlus: An Integrative Approach for Tagging Genes, Gene Families, and Protein Domains

Wei, C. H., Kao, H-Y. & Lu, Z., 2015 Jan 1, In : BioMed research international. 2015, 918710.

Research output: Contribution to journalArticle

Genes
Names
Proteins
Data Mining
PubMed
25 Citations (Scopus)

Quantitative susceptibility mapping of human brain at 3T: A multisite reproducibility study

Lin, P. Y., Chao, T-C. & Wu, M-L., 2015 Mar 1, In : American Journal of Neuroradiology. 36, 3, p. 467-474 8 p.

Research output: Contribution to journalArticle

Brain Mapping
Brain
Red Nucleus
Globus Pallidus
Caudate Nucleus
2014
3 Citations (Scopus)

Accelerated multi-shot diffusion imaging

Madore, B., Chiou, J. Y. G., Chu, R., Chao, T-C. & Maier, S. E., 2014 Jan 1, In : Magnetic Resonance in Medicine. 72, 2, p. 324-336 13 p.

Research output: Contribution to journalArticle

Fourier Analysis
Artifacts
Volunteers
Direction compound
Literature
technical literature
Gene expression
Learning
regulation
2 Citations (Scopus)

Assessment of the kinetic trajectory of the median nerve in the wrist by high-frequency ultrasound

Lin, Y. H., Hsieh, M. Y., Su, F. C. & Wang, S. H., 2014 Apr 28, In : Sensors (Switzerland). 14, 5, p. 7738-7752 15 p.

Research output: Contribution to journalArticle

wrist
Median Nerve
nerves
Wrist
Tunnels

Bipartite editing prediction in wikipedia

Chang, Y. J., Tsai, Y. C. & Kao, H-Y., 2014, In : Journal of Information Science and Engineering. 30, 3, p. 587-603 17 p.

Research output: Contribution to journalArticle

Wikipedia
community
social network
Supervised learning
internet community
2 Citations (Scopus)

Effects of RF profile on precision of quantitative T2 mapping using dual-echo steady-state acquisition

Wu, P. H., Cheng, C. C., Wu, M. L., Chao, T. C., Chung, H. W. & Huang, T. Y., 2014 Jan 1, In : Magnetic Resonance Imaging. 32, 1, p. 102-106 5 p.

Research output: Contribution to journalArticle

Imaging techniques
Experiments
1 Citation (Scopus)

Genealogical-based method for multiple ontology self-extension in MeSH

Guo, Y. W., Tang, Y. T. & Kao, H. Y., 2014 Jun, In : IEEE Transactions on Nanobioscience. 13, 2, p. 124-130 7 p., 6823764.

Research output: Contribution to journalArticle

Ontology
Biological Ontologies
Biological Science Disciplines
Explosions
PubMed
1 Citation (Scopus)

Gene name disambiguation usingmulti-scope species detection

Hsiao, J. C., Wei, C. H. & Kao, H-Y., 2014 Jan 1, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 11, 1, p. 55-62 8 p., 6654152.

Research output: Contribution to journalArticle

Names
Genes
Gene
Data Mining
Cues
6 Citations (Scopus)
Osteoblasts
Ultrasonics
Phosphatases
Bone
Cells
14 Citations (Scopus)

IT2FS-based ontology with soft-computing mechanism for malware behavior analysis

Huang, H. D., Lee, C. S., Wang, M. H. & Kao, H-Y., 2014 Jan 1, In : Soft Computing. 18, 2, p. 267-284 18 p.

Research output: Contribution to journalArticle

Soft computing
Malware
Soft Computing
Ontology
Taiwan
9 Citations (Scopus)

Monitoring tissue inflammation and responses to drug treatments in early stages of mice bone fracture using 50 MHz ultrasound

Chen, Y. C., Lin, Y. H., Wang, S. H., Lin, S. P., Shung, K. K. & Wu, C. C., 2014 Jan 1, In : Ultrasonics. 54, 1, p. 177-186 10 p.

Research output: Contribution to journalArticle

bones
mice
drugs
death
staining
11 Citations (Scopus)

On anonymizing transactions with sensitive items

Wang, S. L., Tsai, Y. C., Kao, H-Y. & Hong, T. P., 2014 Nov 11, In : Applied Intelligence. 41, 4, p. 1043-1058 16 p.

Research output: Contribution to journalArticle

Computer simulation
3 Citations (Scopus)

Using hidden Markov models to predict DNA-binding proteins with sequence and structure information

Hsu, Y. Y., Chen, W. J., Chen, S-H. & Kao, H-Y., 2014 Jan 1, In : Soft Computing. 18, 12, p. 2365-2376 12 p.

Research output: Contribution to journalArticle

DNA-binding Protein
Information Structure
Hidden Markov models
Markov Model
DNA
2013
2 Citations (Scopus)

CoIN: A network analysis for document triage

Hsu, Y. Y. & Kao, H-Y., 2013 Dec 1, In : Database. 2013, bat076.

Research output: Contribution to journalArticle

toxicogenomics
Triage
Electric network analysis
finishing
learning
8 Citations (Scopus)

Distribution and deposition of organic fouling on the microfiltration membrane evaluated by high-frequency ultrasound

Lin, Y. H., Tung, K. L., Wang, S-H., Zhou, Q. & Shung, K. K., 2013 Apr 5, In : Journal of Membrane Science. 433, p. 100-111 12 p.

Research output: Contribution to journalArticle

Microfiltration
fouling
Fouling
Ultrasonics
membranes
2 Citations (Scopus)

High spatial resolution brain functional MRI using submillimeter balanced steady-state free precession acquisition

Wu, P. H., Tsai, P. H., Wu, M-L., Chuang, T. C., Shih, Y. Y., Chung, H. W. & Huang, T. Y., 2013 Jan 1, In : Medical Physics. 40, 12, 122304.

Research output: Contribution to journalArticle

Magnetic Resonance Imaging
Noise
Brain
Visual Cortex
Visual Fields
52 Citations (Scopus)

Large-Scale Event Extraction from Literature with Multi-Level Gene Normalization

van Landeghem, S., Björne, J., Wei, C. H., Hakala, K., Pyysalo, S., Ananiadou, S., Kao, H. Y., Lu, Z., Salakoski, T., van de Peer, Y. & Ginter, F., 2013 Apr 17, In : PloS one. 8, 4, e55814.

Research output: Contribution to journalArticle

Data Mining
Genes
Databases
Licensure
PubMed

Location-aware time-series clustering on optimal sensor arrangement

Yang, Z. H. & Kao, H. Y., 2013 Apr 1, In : International Journal of Electrical Engineering. 20, 2, p. 65-71 7 p.

Research output: Contribution to journalArticle

Time series
Sensors
Greenhouses
Costs
Fires

Measuring semantic relatedness using wikipedia signed network

Yang, W. T. & Kao, H-Y., 2013 Jul, In : Journal of Information Science and Engineering. 29, 4, p. 615-630 16 p.

Research output: Contribution to journalArticle

Wikipedia
Semantics
semantics
editor
Information retrieval
174 Citations (Scopus)

PubTator: a web-based text mining tool for assisting biocuration.

Wei, C. H., Kao, H-Y. & Lu, Z., 2013 Jan 1, In : Unknown Journal. 41, Web Server issue

Research output: Contribution to journalArticle

Data Mining
PubMed
Databases
Growth
4 Citations (Scopus)

Shortest paths anonymization on weighted graphs

Wang, S. L., Tsai, Y. C., Kao, H. Y., Ting, I. H. & Hong, T. P., 2013 Feb 1, In : International Journal of Software Engineering and Knowledge Engineering. 23, 1, p. 65-79 15 p.

Research output: Contribution to journalArticle

Directed graphs
Data privacy
Industry
76 Citations (Scopus)

TmVar: A text mining approach for extracting sequence variants in biomedical literature

Wei, C. H., Harris, B. R., Kao, H-Y. & Lu, Z., 2013 Jun 1, In : Bioinformatics. 29, 11, p. 1433-1439 7 p.

Research output: Contribution to journalArticle

Data Mining
Text Mining
Mutation
Proteins
Bioinformatics
1 Citation (Scopus)
Distillation
Genes
Data Mining
normalization
Experiments
1 Citation (Scopus)

Using a search engine-based mutually reinforcing approach to assess the semantic relatedness of biomedical terms

Hsu, Y. Y., Chen, H. Y. & Kao, H-Y., 2013 Nov 13, In : PloS one. 8, 11, e77868.

Research output: Contribution to journalArticle

Search Engine
engines
Search engines
Semantics
Containers
2 Citations (Scopus)
Transcription factors
Transcription Factors
Genes
Gene expression
Pattern recognition
2012
1 Citation (Scopus)
Distillation
Proteins
Molecular Sequence Annotation
Benchmarking
Protein Databases
12 Citations (Scopus)

Characterization of cholesterol-depleted or -restored cell membranes by depth-sensing nano-indentation

Yang, Y. T., Liao, J-D., Lin, C-C., Chang, C. T., Wang, S-H. & Ju, M-S., 2012 Jan 21, In : Soft Matter. 8, 3, p. 682-687 6 p.

Research output: Contribution to journalArticle

cholesterol
Nanoindentation
Cell membranes
nanoindentation
Cholesterol
6 Citations (Scopus)

Estimation of cell concentration using high-frequency ultrasonic backscattering

Chen, S. H., Lin, Y. H., Li, W. T., Wang, S-H. & Huang, C-C., 2012 Jul 24, In : Journal of Medical and Biological Engineering. 32, 3, p. 157-162 6 p.

Research output: Contribution to journalArticle

Backscattering
Blood
Fibroblasts
Ultrasonics
Density (optical)