International Center for the Scientific Development of Shrimp Aquaculture

Research output

Research output per year 2002 2015 2017 2020 2024

• 29 Article
• 4 Review article
• 3 Conference contribution
• 1 Comment/debate

Research output per year

Research output per year

Search results

• 2024

  Structural insights into the molecular mechanism of phytoplasma immunodominant membrane protein

  Liu, C. Y., Cheng, H. P., Lin, C. P., Liao, Y. T., Ko, T. P., Lin, S. J., Lin, S. S. & Wang, H. C., 2024 May 1, In: IUCrJ. 11, Pt 3, p. 384-394 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Phytoplasma 100%
  • Proteins 46%
  • Membranes 43%
  • Membrane Proteins 42%
  • proteins 40%
• 2023

  A bacterial binary toxin system that kills both insects and aquatic crustaceans: Photorhabdus insect-related toxins A and B

  Wang, H. C., Lin, S. J., Wang, H-C., Kumar, R., Le, P. T. & Leu, J. H., 2023 May, In: PLoS pathogens. 19, 5, e1011330.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • Photorhabdus 100%
  • aquatic crustaceans 97%
  • bacterial toxins 86%
  • Vibrio parahaemolyticus 82%
  • Bacterial Toxins 79%
  5 Citations (Scopus)

• Multiple Nucleocapsid Structural Forms of Shrimp White Spot Syndrome Virus Suggests a Novel Viral Morphogenetic Pathway

  Huang, H. J., Tang, S. L., Chang, Y. C., Wang, H. C., Ng, T. H., Garmann, R. F., Chen, Y. W., Huang, J. Y., Kumar, R., Chang, S. H., Wu, S. R., Chao, C. Y., Matoba, K., Kenji, I., Gelbart, W. M., Ko, T. P., Wang, H. J., Lo, C. F., Chen, L. L. & Wang, H. C., 2023 Apr, In: International journal of molecular sciences. 24, 8, 7525.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • Nucleocapsid 84%
  • viruses 75%
  • Viruses 74%
  • White 53%
  5 Citations (Scopus)
• 2022

  Expression of the AHPND Toxins PirA^vp and PirB^vp Is Regulated by Components of the Vibrio parahaemolyticus Quorum Sensing (QS) System

  Lin, S. J., Huang, J. Y., Le, P. T., Lee, C. T., Chang, C. C., Yang, Y. Y., Su, E. C. Y., Lo, C. F. & Wang, H. C., 2022 Mar 1, In: International journal of molecular sciences. 23, 5, 2889.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Vibrio parahaemolyticus 100%
  • necrosis 96%
  • Quorum Sensing 89%
  • Toxin 67%
  • Genes 67%
  13 Citations (Scopus)

• The regulation of shrimp metabolism by the white spot syndrome virus (WSSV)

  Kumar, R., Huang, J. Y., Ng, Y. S., Chen, C. Y. & Wang, H. C., 2022 Jun, In: Reviews in Aquaculture. 14, 3, p. 1150-1169 20 p.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • White spot syndrome virus 100%
  • virus 73%
  • shrimp 67%
  • metabolism 63%
  • regulation 52%
  19 Citations (Scopus)
• 2020

  An AI-based System for Monitoring Behavior and Growth of Pigs

  Chen, Y. R., Ni, C. T., Ng, K. S., Hsu, C. L., Chang, S. C., Hsu, C. B. & Chen, P. Y., 2020 Dec, Proceedings - 2020 International Computer Symposium, ICS 2020. Institute of Electrical and Electronics Engineers Inc., p. 91-95 5 p. 9359080. (Proceedings - 2020 International Computer Symposium, ICS 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Pig 100%
  • Artificial Intelligence 90%
  • Monitoring 77%
  • Artificial intelligence 66%
  • Image recognition 28%
  2 Citations (Scopus)

• A review of the functional annotations of important genes in the ahpnd-causing pva1 plasmid

  Wang, H. C., Lin, S. J., Mohapatra, A., Kumar, R. & Wang, H. C., 2020 Jul, In: Microorganisms. 8, 7, p. 1-14 14 p., 996.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • Molecular Sequence Annotation 100%
  • Plasmids 61%
  • anti-restriction proteins 51%
  • Type II Secretion Systems 43%
  • Transposases 35%
  19 Citations (Scopus)

• A shrimp glycosylase protein, PmENGase, interacts with WSSV envelope protein VP41B and is involved in WSSV pathogenesis

  Huang, J. Y., Wang, H. C., Chen, Y. C., Wang, P. S., Lin, S. J., Chang, Y. S., Liu, K. F. & Lo, C. F., 2020 Jul, In: Developmental and Comparative Immunology. 108, 103667.

  Research output: Contribution to journal › Article › peer-review

  • White spot syndrome virus 1 100%
  • Viral Envelope Proteins 88%
  • Virion 24%
  • endo-alpha-sialidase 23%
  • Proteins 23%
  4 Citations (Scopus)

• A System for Analyzing Pig's Behavior with AI

  Ni, C. T., Ng, K. S., Chen, Y. R., Chang, S. C., Hsu, C. B., Chen, P. Y. & Liao, S. C., 2020 Sept 28, 2020 IEEE International Conference on Consumer Electronics - Taiwan, ICCE-Taiwan 2020. Institute of Electrical and Electronics Engineers Inc., 9258228. (2020 IEEE International Conference on Consumer Electronics - Taiwan, ICCE-Taiwan 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • artificial intelligence 100%
  • swine 87%
  • Image recognition 78%
  • User interfaces 60%
  • Artificial intelligence 60%
  2 Citations (Scopus)

• Insights into gene regulation of the halovirus His2 infecting Haloarcula hispanica

  Lee, S. T. M., Ding, J. Y., Chiang, P. W., Dyall-Smith, M. & Tang, S. L., 2020 May 1, In: MicrobiologyOpen. 9, 5, e1016.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Haloarcula 100%
  • Viral Genes 30%
  • Genes 20%
  • Gene Expression 15%
  • Oligonucleotide Array Sequence Analysis 13%
  3 Citations (Scopus)

• Shifting in the Dominant Bacterial Group Endozoicomonas Is Independent of the Dissociation With Coral Symbiont Algae

  Shiu, J. H., Yu, S. P., Fong, C. L., Ding, J. Y., Tan, C. J., Fan, T. Y., Lu, C. Y. & Tang, S. L., 2020 Jul 31, In: Frontiers in Microbiology. 11, 1791.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Anthozoa 100%
  • rRNA Genes 29%
  • 16S Ribosomal RNA 29%
  • Gene Dosage 16%
  • Hot Temperature 10%
  16 Citations (Scopus)

• Structural insight into the differential interactions between the DNA mimic protein SAUGI and two gamma herpesvirus uracil-DNA glycosylases

  Liao, Y. T., Lin, S. J., Ko, T. P., Liu, C. Y., Hsu, K. C. & Wang, H. C., 2020 Oct 1, In: International Journal of Biological Macromolecules. 160, p. 903-914 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Uracil-DNA Glycosidase 100%
  • Staphylococcus Aureus 93%
  • Virus 81%
  • Herpesviridae 74%
  • Leucine 67%
  1 Citation (Scopus)
• 2019

  Structural insights into the interaction between phytoplasmal effector causing phyllody 1 and MADS transcription factors

  Liao, Y. T., Lin, S. S., Lin, S. J., Sun, W. T., Shen, B. N., Cheng, H. P., Lin, C. P., Ko, T. P., Chen, Y. F. & Wang, H. C., 2019 Nov 1, In: Plant Journal. 100, 4, p. 706-719 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Phytoplasma 100%
  • Peanut witches'-broom phytoplasma 85%
  • phyllody 78%
  • Arachis 58%
  • transcription factors 39%
  22 Citations (Scopus)

• Structural insights to the heterotetrameric interaction between the vibrio parahaemolyticus pirA^vp and pirB^vp toxins and activation of the cry-like pore-forming domain

  Lin, S. J., Chen, Y. F., Hsu, K. C., Chen, Y. L., Ko, T. P., Lo, C. F., Wang, H. C. & Wang, H. C., 2019 Apr, In: Toxins. 11, 4, 233.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Vibrio parahaemolyticus 100%
  • Toxin 67%
  • Penaeidae 64%
  • Necrosis 43%
  • Kd 35%
  32 Citations (Scopus)
• 2018

  A newly designed primer revealed high phylogenetic diversity of endozoicomonas in coral reefs

  Shiu, J. H., Ding, J. Y., Tseng, C. H., Lou, S. P., Mezaki, T., Wu, Y. T., Wang, H. I. & Tang, S. L., 2018, In: Microbes and Environments. 33, 2, p. 172-185 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • coral reefs 100%
  • coral reef 83%
  • coral 78%
  • corals 73%
  • phylogenetics 71%
  9 Citations (Scopus)

• Draft genome sequence of Vibrio parahaemolyticus strain M1-1, which causes acute hepatopancreatic necrosis disease in shrimp in Vietnam

  Kumar, R., Chang, C. C., Ng, T. H., Ding, J. Y., Tseng, T. C., Lo, C. F. & Wang, H. C., 2018 Jan 1, In: Genome Announcements. 6, 3, e01468-17.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Vibrio parahaemolyticus 100%
  • Vietnam 84%
  • Necrosis 54%
  • Genome 47%
  • Virulence 30%
  12 Citations (Scopus)

• Local binary pattern circuit generator with adjustable parameters for feature extraction

  Hu, M. C., Ng, K. S., Chen, P. Y., Hsiao, Y. J. & Li, C. H., 2018 Aug, In: IEEE Transactions on Intelligent Transportation Systems. 19, 8, p. 2582-2591 10 p., 8085401.

  Research output: Contribution to journal › Article › peer-review

  • Feature extraction 100%
  • Computer hardware 76%
  • Networks (circuits) 71%
  • Object detection 44%
  • Image resolution 23%
  4 Citations (Scopus)
• 2017

  A design of automatic water leak detection device

  Ng, K. S., Chen, P. Y. & Tseng, Y. C., 2017 Sept 8, 2017 2nd International Conference on Opto-Electronic Information Processing, ICOIP 2017. Institute of Electrical and Electronics Engineers Inc., p. 70-73 4 p. 8030701. (2017 2nd International Conference on Opto-Electronic Information Processing, ICOIP 2017).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Leak detection 100%
  • Pipeline 90%
  • Leakage (fluid) 67%
  • Water pipelines 55%
  • leakage 51%
  16 Citations (Scopus)

• Haloterrigena mahii sp. nov., an extremely halophilic archaeon from a solar saltern

  Ding, J. Y., Chen, S. C., Lai, M. C. & Liao, T. L., 2017 May, In: International Journal of Systematic and Evolutionary Microbiology. 67, 5, p. 1333-1338 6 p., 001811.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Haloterrigena 100%
  • Archaea 56%
  • genome 43%
  • Genome 31%
  • new species 28%
  12 Citations (Scopus)

• Shrimp miR-10a is co-opted by white spot syndrome virus to increase viral gene expression and viral replication

  Huang, J. Y., Kang, S. T., Chen, I. T., Chang, L. K., Lin, S. S., Kou, G. H., Chu, C. Y. & Lo, C. F., 2017 Sept 6, In: Frontiers in Immunology. 8, SEP, 1084.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • Viral Genes 74%
  • 5' Untranslated Regions 74%
  • MicroRNAs 53%
  • Penaeidae 48%
  16 Citations (Scopus)

• Structural insights into the cytotoxic mechanism of Vibrio parahaemolyticus PirA^vp and PirB^vp toxins

  Lin, S. J., Hsu, K. C. & Wang, H. C., 2017 Dec, In: Marine Drugs. 15, 12, 373.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • Vibrio parahaemolyticus 100%
  • Toxin 67%
  • Necrosis 43%
  • Penaeidae 43%
  • Agriculture 32%
  50 Citations (Scopus)

• The monomeric form of Neisseria DNA mimic protein DMP19 prevents DNA from binding to the histone-like HU protein

  Huang, M. F., Lin, S. J., Ko, T. P., Liao, Y. T., Hsu, K. C. & Wang, H. C., 2017 Dec, In: PloS one. 12, 12, e0189461.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Neisseria 100%
  • histones 69%
  • Histones 67%
  • DNA 40%
  • Crosslinking 30%
  7 Citations (Scopus)
• 2016

  Genomic insight into the host-endosymbiont relationship of Endozoicomonas montiporae CL-33^T with its coral host

  Ding, J. Y., Shiu, J. H., Chen, W. M., Chiang, Y. R. & Tang, S. L., 2016 Mar 8, In: Frontiers in Microbiology. 7, MAR, 251.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Anthozoa 100%
  • Bacteria 21%
  • Genome 15%
  • 7,8-dihydro-8-oxoguanine 13%
  • Isocitrate Lyase 13%
  78 Citations (Scopus)

• Integrated multi-omics analyses reveal the biochemical mechanisms and phylogenetic relevance of anaerobic androgen biodegradation in the environment

  Yang, F. C., Chen, Y. L., Tang, S. L., Yu, C. P., Wang, P. H., Ismail, W., Wang, C. H., Ding, J. Y., Yang, C. Y., Yang, C. Y. & Chiang, Y. R., 2016 Aug 1, In: ISME Journal. 10, 8, p. 1967-1983 17 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • multiomics 100%
  • androgen 92%
  • biochemical mechanisms 79%
  • androgens 66%
  • biodegradation 65%
  43 Citations (Scopus)
• 2015

  A novel detection platform for shrimp white spot syndrome virus using an ICP11-dependent immunomagnetic reduction (IMR) assay

  Liu, B. H., Lin, Y. C., Ho, C. S., Yang, C. C., Chang, Y. T., Chang, J. F., Li, C. Y., Cheng, C. S., Huang, J. Y., Lee, Y. F., Hsu, M. H., Lin, F. C., Wang, H. C., Lo, C. F., Yang, S. Y. & Wang, H. C., 2015 Sept 18, In: PloS one. 10, 9, e0138207.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • White spot syndrome virus 84%
  • shrimp 57%
  • White 53%
  • assays 34%
  10 Citations (Scopus)

• Erratum: The opportunistic marine pathogen Vibrio parahaemolyticus becomes virulent by acquiring a plasmid that expresses a deadly toxin (Proceedings of the National Academy of Sciences of the United States of America (2015) 112 (10798-10803))

  Lee, C. T., Chen, I. T., Yang, Y. T., Ko, T. P., Huang, Y. T., Huang, J. Y., Huang, M. F., Lin, S. J., Chen, C. Y., Lin, S. S., Lightner, D. V., Wang, H. C., Wang, A. H. J., Wang, H. C., Hor, L. I. & Lo, C. F., 2015 Sept 29, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 39, p. E5445

  Research output: Contribution to journal › Comment/debate › peer-review

  Open Access
  15 Citations (Scopus)

• The opportunistic marine pathogen Vibrio parahaemolyticus becomes virulent by acquiring a plasmid that expresses a deadly toxin

  Lee, C. T., Chen, I. T., Yang, Y. T., Ko, T. P., Huang, Y. T., Huang, J. Y., Huang, M. F., Lin, S. J., Chen, C. Y., Lin, S. S., Lightner, D. V., Wang, H. C., Wang, A. H. J., Wang, H. C., Hor, L. I. & Lo, C. F., 2015 Aug 25, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 34, p. 10798-10803 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Vibrio parahaemolyticus 100%
  • Plasmids 57%
  • Photorhabdus 24%
  • Necrosis 21%
  • Penaeidae 21%
  461 Citations (Scopus)

• White spot syndrome virus protein kinase 1 defeats the host cell's iron-withholding defense mechanism by interacting with host ferritin

  Lin, S. J., Lee, D. Y., Wang, H. C., Kang, S. T., Hwang, P. P., Kou, G. H., Huang, M. F., Chang, G. D. & Loa, C. F., 2015, In: Journal of Virology. 89, 2, p. 1083-1093 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • White spot syndrome virus 84%
  • ferritin 74%
  • Ferritins 66%
  • defense mechanisms 64%
  21 Citations (Scopus)
• 2014

  Complete genome sequence of the extremely halophilic archaeon Haloarcula hispanica strain N601

  Ding, J. Y., Chiang, P. W., Hong, M. J., Dyall-Smith, M. & Tang, S. L., 2014, In: Genome Announcements. 2, 2, e00178-14.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Haloarcula 100%
  • Archaea 62%
  • Genome 34%
  13 Citations (Scopus)

• Construction and application of a protein interaction map for white spot syndrome virus (WSSV)

  Sangsuriya, P., Huang, J. Y., Chu, Y. F., Phiwsaiya, K., Leekitcharoenphon, P., Meemetta, W., Senapin, S., Huang, W. P., Withyachumnarnkul, B., Flegel, T. W. & Lo, C. F., 2014 Jan, In: Molecular and Cellular Proteomics. 13, 1, p. 269-282 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • Protein Interaction Maps 79%
  • White 53%
  • Yeasts 25%
  • Viral Proteins 22%
  31 Citations (Scopus)
• 2013

  A model for apoptotic interaction between white spot syndrome virus and shrimp

  Leu, J. H., Lin, S. J., Huang, J. Y., Chen, T. C. & Lo, C. F., 2013 Apr, In: Fish and Shellfish Immunology. 34, 4, p. 1011-1017 7 p.

  Research output: Contribution to journal › Article › peer-review

  • White spot syndrome virus 1 100%
  • White spot syndrome virus 84%
  • Apoptotic 73%
  • apoptosis 72%
  • virus 62%
  73 Citations (Scopus)
• 2012

  Penaeus monodon thioredoxin restores the DNA binding activity of oxidized white spot syndrome virus IE1

  Huang, J. Y., Liu, W. J., Wang, H. C., Lee, D. Y., Leu, J. H., Wang, H. C., Tsai, M. H., Kang, S. T., Chen, I. T., Kou, G. H., Chang, G. D. & Lo, C. F., 2012 Sept 15, In: Antioxidants and Redox Signaling. 17, 6, p. 914-926 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • Penaeidae 97%
  • Thioredoxin 80%
  • Thioredoxins 80%
  • White 53%
  19 Citations (Scopus)

• Spawning stress triggers WSSV replication in brooders via the activation of shrimp STAT

  Lin, S. J., Hsia, H. L., Liu, W. J., Huang, J. Y., Liu, K. F., Chen, W. Y., Yeh, Y. C., Huang, Y. T., Lo, C. F., Kou, G. H. & Wang, H. C., 2012 Sept, In: Developmental and Comparative Immunology. 38, 1, p. 128-135 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Dental Caries 100%
  • Densovirinae 56%
  • Disease Outbreaks 54%
  • White spot syndrome virus 1 47%
  • Aquaculture 41%
  16 Citations (Scopus)
• 2011

  White spot syndrome virus induces metabolic changes resembling the warburg effect in shrimp hemocytes in the early stage of infection

  Chen, I. T., Aoki, T., Huang, Y. T., Hirono, I., Chen, T. C., Huang, J. Y., Chang, G. D., Lo, C. F. & Wang, H. C., 2011 Dec, In: Journal of Virology. 85, 24, p. 12919-12928 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • Hemocytes 86%
  • White spot syndrome virus 84%
  • hemocytes 67%
  • shrimp 57%
  164 Citations (Scopus)
• 2010

  A 3D model of the membrane protein complex formed by the white spot syndrome virus structural proteins

  Chang, Y. S., Liu, W. J., Lee, C. C., Chou, T. L., Lee, Y. T., Wu, T. S., Huang, J. Y., Huang, W. T., Lee, T. L., Kou, G. H., Wang, A. H. J. & Lo, C. F., 2010, In: PloS one. 5, 5, e10718.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • Viral Structural Proteins 87%
  • White spot syndrome virus 84%
  • membrane proteins 58%
  • White 53%
  73 Citations (Scopus)

• The biotechnological potential of the extreme halophilic archaea Haloterrigena sp. H13 in xenobiotic metabolism using a comparative genomics approach

  Ding, J. Y. & Lai, M. C., 2010 Jul, In: Environmental Technology. 31, 8-9, p. 905-914 10 p.

  Research output: Contribution to journal › Article › peer-review

  • xenobiotics 100%
  • Xenobiotic Agent 97%
  • genomics 84%
  • Naphthalene 75%
  • metabolism 70%
  13 Citations (Scopus)
• 2002

  Transcriptional analysis of the DNA polymerase gene of shrimp white spot syndrome virus

  Chen, L. L., Wang, H. C., Huang, C. J., Peng, S. E., Chen, Y. G., Lin, S. J., Chen, W. Y., Dai, C. F., Yu, H. T., Wang, C. H., Lo, C. F. & Kou, G. H., 2002, In: Virology. 301, 1, p. 136-147 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • White spot syndrome virus 1 100%
  • DNA-Directed DNA Polymerase 71%
  • Nucleotides 51%
  • DNA 35%
  • pol Genes 30%
  100 Citations (Scopus)