Brice Horton Ii Paul


  • 5289 Citations
  • 20 h-Index
1992 …2019
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Personal profile


  • 1992 ~ 1997 Ph.D., Computer Science, UC Berkeley, USA
  • 1989 ~ 1992 M.S., Biophysics, Kyoto University, JPN
  • 1989 B.S., Molecular Biology, UUniversity of Washington, USA


  • 2018 ~ present Professor, Department of Computer Science and Information Eng., National Cheng Kung University
  • 2015 ~ 2018 Prime Senior Researcher, Computational Biology Research Center, AIST
  • 2006 ~ 2018 Visiting Associate Professor, Kyoto University
  • 2003 ~ 2014 Research Team Leader, Computational Biology Research Center, AIST
  • 1998 ~ 2000 Researcher, Real World Computing Partnership

Research Interests

  • Motif Discovery Algorithms
  • Next Generation Sequencing Data Analysis
  • Machine Learning on Biological Sequence Data & Protein Subcellular Localization Informatics
  • Medical Informatics
  • Protein Subcellular Localization Informatics
  • Protein Subcellular Localization

Fingerprint Dive into the research topics where Brice Horton Ii Paul is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

Genes Engineering & Materials Science
Computational Biology Medicine & Life Sciences
Proteins Medicine & Life Sciences
Genome Medicine & Life Sciences
Genomics Medicine & Life Sciences
Informatics Medicine & Life Sciences
Gene expression Engineering & Materials Science
Databases Medicine & Life Sciences

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 1992 2019

Estimating genome-wide off-target effects for pyrrole-imidazole polyamide binding by a pathway-based expression profiling approach

Lin, J., Krishnamurthy, S., Yoda, H., Shinozaki, Y., Watanabe, T., Koshikawa, N., Takatori, A., Horton, P. & Nagase, H., 2019 Apr, In : PloS one. 14, 4, e0215247.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Novel lineage-specific transmembrane β-barrel proteins in the endoplasmic reticulum of Entamoeba histolytica

Santos, H. J., Imai, K., Makiuchi, T., Tomii, K., Paul, B. H. I., Nozawa, A., Okada, K., Tozawa, Y. & Nozaki, T., 2019 Sep 1, In : FEBS Journal. 286, 17, p. 3416-3432 17 p.

Research output: Contribution to journalArticle

Endoplasmic Reticulum
Membrane Proteins

A bioinformatics potpourri

Schönbach, C., Li, J., Ma, L., Horton, P., Sjaugi, M. F. & Ranganathan, S., 2018 Jan 19, In : BMC genomics. 19, 920.

Research output: Contribution to journalEditorial

Computational Biology
Precision Medicine
1 Citation (Scopus)

EAGLE: Explicit Alternative Genome Likelihood Evaluator

Kuo, T., Frith, M. C., Sese, J. & Horton, P., 2018 Apr 20, In : BMC Medical Genomics. 11, 28.

Research output: Contribution to journalArticle


Sequence homology in eukaryotes (SHOE): Interactive visual tool for promoter analysis 06 Biological Sciences 0604 Genetics

Polouliakh, N., Horton, P., Shibanai, K., Takata, K., Ludwig, V., Ghosh, S. & Kitano, H., 2018 Sep 27, In : BMC genomics. 19, 1, 715.

Research output: Contribution to journalArticle

Biological Science Disciplines
Sequence Homology
Transcription Factors
Gene Expression