• 1026 Citations
  • 14 h-Index
19982020

Research output per year

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Research Output

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Article
2019

C-3PO: Click-sequence-aware deeP neural network (DNN)-based Pop-uPs recOmmendation: I know you’ll click

Huang, T. T. H. D. & Kao, H. Y., 2019 Nov 1, In : Soft Computing. 23, 22, p. 11793-11799 7 p.

Research output: Contribution to journalArticle

2017

k- -anonymization of multiple shortest paths

Wang, S. L., Tsai, Y. C., Hong, T. P. & Kao, H. Y., 2017 Aug 1, In : Soft Computing. 21, 15, p. 4215-4226 12 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Word co-occurrence augmented topic model in short text

Chen, G. B. & Kao, H. Y., 2017 Jan 1, In : Intelligent Data Analysis. 21, S1, p. S55-S70

Research output: Contribution to journalArticle

4 Citations (Scopus)
2016

AuDis: an automatic CRF-enhanced disease normalization in biomedical text

Lee, H. C., Hsu, Y. Y. & Kao, H. Y., 2016 Jan 1, In : Database : the journal of biological databases and curation. 2016

Research output: Contribution to journalArticle

6 Citations (Scopus)
2015

Curatable Named-Entity Recognition Using Semantic Relations

Hsu, Y. Y. & Kao, H-Y., 2015 Jul 1, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 12, 4, p. 785-792 8 p., 6945344.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Edge types vs privacy in K-anonymization of shortest paths

Tsai, Y. C., Wang, S. L., Kao, H. Y. & Hong, T. P., 2015 Jun 1, In : Applied Soft Computing Journal. 31, p. 348-359 12 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

GNormPlus: An Integrative Approach for Tagging Genes, Gene Families, and Protein Domains

Wei, C. H., Kao, H. Y. & Lu, Z., 2015 Jan 1, In : BioMed research international. 2015, 918710.

Research output: Contribution to journalArticle

71 Citations (Scopus)
2014

Bipartite editing prediction in wikipedia

Chang, Y. J., Tsai, Y. C. & Kao, H-Y., 2014, In : Journal of Information Science and Engineering. 30, 3, p. 587-603 17 p.

Research output: Contribution to journalArticle

Genealogical-based method for multiple ontology self-extension in MeSH

Guo, Y. W., Tang, Y. T. & Kao, H. Y., 2014 Jun, In : IEEE Transactions on Nanobioscience. 13, 2, p. 124-130 7 p., 6823764.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Gene name disambiguation usingmulti-scope species detection

Hsiao, J. C., Wei, C. H. & Kao, H-Y., 2014 Jan 1, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 11, 1, p. 55-62 8 p., 6654152.

Research output: Contribution to journalArticle

1 Citation (Scopus)

IT2FS-based ontology with soft-computing mechanism for malware behavior analysis

Huang, H. D., Lee, C. S., Wang, M. H. & Kao, H-Y., 2014 Jan 1, In : Soft Computing. 18, 2, p. 267-284 18 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

On anonymizing transactions with sensitive items

Wang, S. L., Tsai, Y. C., Kao, H-Y. & Hong, T. P., 2014 Nov 11, In : Applied Intelligence. 41, 4, p. 1043-1058 16 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Using hidden Markov models to predict DNA-binding proteins with sequence and structure information

Hsu, Y. Y., Chen, W. J., Chen, S-H. & Kao, H-Y., 2014 Jan 1, In : Soft Computing. 18, 12, p. 2365-2376 12 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)
2013

CoIN: A network analysis for document triage

Hsu, Y. Y. & Kao, H. Y., 2013 Dec 1, In : Database. 2013, bat076.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Large-Scale Event Extraction from Literature with Multi-Level Gene Normalization

van Landeghem, S., Björne, J., Wei, C. H., Hakala, K., Pyysalo, S., Ananiadou, S., Kao, H. Y., Lu, Z., Salakoski, T., van de Peer, Y. & Ginter, F., 2013 Apr 17, In : PloS one. 8, 4, e55814.

Research output: Contribution to journalArticle

55 Citations (Scopus)

Location-aware time-series clustering on optimal sensor arrangement

Yang, Z. H. & Kao, H. Y., 2013 Apr 1, In : International Journal of Electrical Engineering. 20, 2, p. 65-71 7 p.

Research output: Contribution to journalArticle

Measuring semantic relatedness using wikipedia signed network

Yang, W. T. & Kao, H-Y., 2013 Jul, In : Journal of Information Science and Engineering. 29, 4, p. 615-630 16 p.

Research output: Contribution to journalArticle

PubTator: a web-based text mining tool for assisting biocuration.

Wei, C. H., Kao, H. Y. & Lu, Z., 2013 Jul, In : Unknown Journal. 41, Web Server issue, p. W518-522

Research output: Contribution to journalArticle

210 Citations (Scopus)

Shortest paths anonymization on weighted graphs

Wang, S. L., Tsai, Y. C., Kao, H. Y., Ting, I. H. & Hong, T. P., 2013 Feb 1, In : International Journal of Software Engineering and Knowledge Engineering. 23, 1, p. 65-79 15 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

TmVar: A text mining approach for extracting sequence variants in biomedical literature

Wei, C. H., Harris, B. R., Kao, H. Y. & Lu, Z., 2013 Jun 1, In : Bioinformatics. 29, 11, p. 1433-1439 7 p.

Research output: Contribution to journalArticle

81 Citations (Scopus)
1 Citation (Scopus)

Using a search engine-based mutually reinforcing approach to assess the semantic relatedness of biomedical terms

Hsu, Y. Y., Chen, H. Y. & Kao, H. Y., 2013 Nov 13, In : PloS one. 8, 11, e77868.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2 Citations (Scopus)
2012

Accelerating literature curation with text-mining tools: a case study of using PubTator to curate genes in PubMed abstracts.

Wei, C. H., Harris, B. R., Li, D., Berardini, T. Z., Huala, E., Kao, H. Y. & Lu, Z., 2012, In : Database : the journal of biological databases and curation. 2012, p. bas041

Research output: Contribution to journalArticle

43 Citations (Scopus)
1 Citation (Scopus)

SR4GN: A species recognition software tool for gene normalization

Wei, C. H., Kao, H. Y. & Lu, Z., 2012 Jun 5, In : PloS one. 7, 6, e38460.

Research output: Contribution to journalArticle

38 Citations (Scopus)
2011

Cross-species gene normalization by species inference

Wei, C. H. & Kao, H. Y., 2011 Oct 3, In : BMC Bioinformatics. 12, SUPPL. 8, S5.

Research output: Contribution to journalArticle

41 Citations (Scopus)

Extending suppression for anonymization on set-valued data

Wang, S. L., Tsai, Y. C., Kao, H-Y. & Hong, T. P., 2011 Dec 1, In : International Journal of Innovative Computing, Information and Control. 7, 12, p. 6849-6863 15 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Inference of transcriptional regulatory network by bootstrapping patterns

Wang, H. C., Chen, Y. HS., Kao, H. Y. & Tsai, S. J., 2011 May 1, In : Bioinformatics. 27, 10, p. 1422-1428 7 p., btr155.

Research output: Contribution to journalArticle

4 Citations (Scopus)

The clustering of hot topics on plurk

Yang, Z. H. & Kao, H. Y., 2011 Jul 1, In : Journal of Computers. 22, 2

Research output: Contribution to journalArticle

2 Citations (Scopus)

The gene normalization task in BioCreative III

Lu, Z., Kao, H. Y., Wei, C. H., Huang, M., Liu, J., Kuo, C. J., Hsu, C. N., Tsai, R. T., Dai, H. J., Okazaki, N., Cho, H. C., Gerner, M., Solt, I., Agarwal, S., Liu, F., Vishnyakova, D., Ruch, P., Romacker, M., Rinaldi, F., Bhattacharya, S. & 8 others, Srinivasan, P., Liu, H., Torii, M., Matos, S., Campos, D., Verspoor, K., Livingston, K. M. & Wilbur, W. J., 2011 Oct 3, In : BMC Bioinformatics. 12, SUPPL. 8, S2.

Research output: Contribution to journalArticle

84 Citations (Scopus)

Using unsupervised patterns to extract gene regulation relationships for network construction

Tang, Y. T., Li, S. J., Kao, H. Y., Tsai, S. J. & Wang, H. C., 2011 May 17, In : PloS one. 6, 5, e19633.

Research output: Contribution to journalArticle

4 Citations (Scopus)
2010

Blog popularity mining using social interconnection analysis

Lin, C. L. & Kao, H. Y., 2010 Jul 1, In : IEEE Internet Computing. 14, 4, p. 41-49 9 p., 5432133.

Research output: Contribution to journalArticle

13 Citations (Scopus)
2005

WISDOM: Web Intrapage Informative Structure Mining based on Document Object Model

Kao, H. Y., Ho, J. M. & Chen, M. S., 2005 May 1, In : IEEE Transactions on Knowledge and Data Engineering. 17, 5, p. 614-627 14 p.

Research output: Contribution to journalArticle

38 Citations (Scopus)
2004

Mining Web Informative Structures and Contents Based on Entropy Analysis

Kao, H. Y., Lin, S. H., Ho, J. M. & Chen, M. S., 2004 Jan 1, In : IEEE Transactions on Knowledge and Data Engineering. 16, 1, p. 41-55 15 p.

Research output: Contribution to journalArticle

64 Citations (Scopus)