• 416 Citations
  • 11 h-Index
20032019

Research output per year

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Research Output

  • 416 Citations
  • 11 h-Index
  • 27 Article
  • 8 Conference contribution
  • 2 Conference article
  • 1 Editorial

AH-DB: Collecting protein structure pairs before and after binding

Chang, D. T. H., Yao, T. J., Fan, C. Y., Chiang, C. Y. & Bai, Y. H., 2012 Jan 1, In : Nucleic acids research. 40, D1, p. D472-D478

Research output: Contribution to journalArticle

10 Citations (Scopus)

An automatic method to calculate heart rate from zebrafish larval cardiac videos

Kang, C. P., Tu, H. C., Fu, T. F., Wu, J. M., Chu, P. H. & Chang, D. T. H., 2018 May 9, In : BMC Bioinformatics. 19, 1, 169.

Research output: Contribution to journalArticle

3 Citations (Scopus)

An efficient mechanism for prediction of protein-ligand interactions based on analysis of protein tertiary substructures

Chang, T-H., Chen, C. Y., Oyang, Y. J., Juan, H. F. & Huang, H. C., 2004 Sep 24, Proceedings - Fourth IEEE Symposium on Bioinformatics and Bioengineering, BIBE 2004. p. 427-433 7 p. (Proceedings - Fourth IEEE Symposium on Bioinformatics and Bioengineering, BIBE 2004).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Citations (Scopus)

An orange social platform for young people

Chang, T-H., Hung, Y-H., Li, S. C., Cheng, H. H., Wang, H., Chou, C. W. & Tang, Y. C., 2013 Jul 12, ICOT 2013 - 1st International Conference on Orange Technologies. p. 325-327 3 p. 6521224. (ICOT 2013 - 1st International Conference on Orange Technologies).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

A study on promoter characteristics of head-tohead genes in Saccharomyces cerevisiae

Chang, D. T. H., Wu, C. Y. & Fan, C. Y., 2012 Jan 1, In : Series on Advances in Bioinformatics and Computational Biology. 13, S11.

Research output: Contribution to journalConference article

5 Citations (Scopus)

A study on the flexibility of enzyme active sites

Weng, Y. Z., Chang, D. T., Huang, Y. F. & Lin, C. W., 2011 Feb 15, In : BMC Bioinformatics. 12, SUPPL. 1, S32.

Research output: Contribution to journalArticle

11 Citations (Scopus)

AutoBind: Automatic extraction of protein-ligand-binding affinity data from biological literature

Chang, D. T. H., Ke, C. H., Lin, J. H. & Chiang, J. H., 2012 Aug 1, In : Bioinformatics. 28, 16, p. 2162-2168 7 p., bts367.

Research output: Contribution to journalArticle

8 Citations (Scopus)

CCProf: Exploring conformational change profile of proteins

Chang, C. W., Chou, C. W. & Chang, D. T. H., 2016 Jan 1, In : Database. 2016, baw029.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Combining Phylogenetic Profiling-Based and Machine Learning-Based Techniques to Predict Functional Related Proteins

Lin, T. W., Wu, J. W. & Chang, D. T. H., 2013 Sep 19, In : PloS one. 8, 9, e75940.

Research output: Contribution to journalArticle

10 Citations (Scopus)
2 Citations (Scopus)

Data classification with a generalized Gaussian components based density estimation algorithm

Hsieh, C. H., Chang, D. T. H. & Oyang, Y. J., 2009 Nov 18, 2009 International Joint Conference on Neural Networks, IJCNN 2009. p. 1259-1266 8 p. 5179000. (Proceedings of the International Joint Conference on Neural Networks).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Citations (Scopus)

Data classification with a relaxed model of variable kernel density estimation

Oyang, Y. J., Ou, Y. Y., Hwang, S. C., Chen, C. Y. & Chang, D. T. H., 2005 Dec 1, Proceedings of the International Joint Conference on Neural Networks, IJCNN 2005. p. 2831-2836 6 p. 1556374. (Proceedings of the International Joint Conference on Neural Networks; vol. 5).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

8 Citations (Scopus)

DBD2BS: Connecting a DNA-binding protein with its binding sites

Chien, T. Y., Lin, C. K., Lin, C. W., Weng, Y. Z., Chen, C. Y. & Chang, D. T. H., 2012 Jul, In : Nucleic acids research. 40, W1, p. W173-W179

Research output: Contribution to journalArticle

3 Citations (Scopus)

E1DS: catalytic site prediction based on 1D signatures of concurrent conservation.

Chien, T. Y., Chang, D. T. H., Chen, C. Y., Weng, Y. Z. & Hsu, C. M., 2008 Jul 1, In : Nucleic acids research. 36, Web Server issue, p. W291-296

Research output: Contribution to journalArticle

10 Citations (Scopus)

Expediting protein structural analysis with an efficient kernel density estimation algorithm

Oyang, Y. J., Chang, T-H., Chen, C. Y. & Hwang, S. C., 2003 Jan 1, Proceedings - IEEE 5th International Symposium on Multimedia Software Engineering, ISMSE 2003. Institute of Electrical and Electronics Engineers Inc., p. 297-304 8 p. 1254455. (Proceedings - IEEE 5th International Symposium on Multimedia Software Engineering, ISMSE 2003).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Introduction to the 23rd International Conference on Genome Informatics (GIW2012)

Chiang, J-H., Chang, T-H. & Kao, H-Y., 2013 Apr 10, In : Gene. 518, 1, 1 p.

Research output: Contribution to journalEditorial

Light-RCV: A lightweight read coverage viewer for next generation sequencing data

Chang, C. W., Lee, W. B., Chen-Deng, A., Liu, T., Tseng, J. T. & Chang, D. T. H., 2015 Dec 9, In : BMC Bioinformatics. 16, 18, S11.

Research output: Contribution to journalArticle

1 Citation (Scopus)

MEDock: A web server for efficient prediction of ligand binding sites based on a novel optimization algorithm

Chang, D. T. H., Oyang, Y. J. & Lin, J. H., 2005 Jul 1, In : Nucleic acids research. 33, SUPPL. 2, p. W233-W238

Research output: Contribution to journalArticle

80 Citations (Scopus)

On the design of optimization algorithms for prediction of molecular interactions

Chang, D. T. H., Lin, J. H., Hsieh, C. H. & Oyang, Y. J., 2009 Nov 18, Proceedings of the 2009 9th IEEE International Conference on Bioinformatics and BioEngineering, BIBE 2009. p. 208-215 8 p. 5211282. (Proceedings of the 2009 9th IEEE International Conference on Bioinformatics and BioEngineering, BIBE 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

On the design of optimization algorithms for prediction of molecular interactions

Chang, D. T. H., Lin, J. H., Hsieh, C. H. & Oyang, Y. J., 2010 Jun 1, In : International Journal on Artificial Intelligence Tools. 19, 3, p. 267-280 14 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Platform-based shear force sensor

Wang, W. C., Chang, T. H. & Tsui, C. L., 2015 Dec 2, In : MATEC Web of Conferences. 32, 06003.

Research output: Contribution to journalConference article

PRASA: An integrated web server that analyzes protein interaction types

Fan, C. Y., Bai, Y. H., Huang, C. Y., Yao, T. J., Chiang, W. H. & Chang, D. T. H., 2013 Apr 10, In : Gene. 518, 1, p. 78-83 6 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Predicting cis-regulatory modules by method integration

Chang, T-H., Shiu, G. Y. & Sun, Y. J., 2014 Jan 1, 11th IEEE International Conference on Control and Automation, IEEE ICCA 2014. IEEE Computer Society, p. 491-494 4 p. 6870968. (IEEE International Conference on Control and Automation, ICCA).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Predicting microRNA precursors with a generalized Gaussian components based density estimation algorithm

Hsieh, C. H., Chang, D. T., Hsueh, C. H., Wu, C. Y. & Oyang, Y. J., 2010 Jan 18, In : BMC Bioinformatics. 11, SUPPLL.1, S52.

Research output: Contribution to journalArticle

15 Citations (Scopus)

Predicting protein-protein interactions in unbalanced data using the primary structure of proteins

Yu, C. Y., Chou, L. C. & Chang, D. T., 2010 Apr 2, In : BMC Bioinformatics. 11, 167.

Research output: Contribution to journalArticle

57 Citations (Scopus)

Predicting target DNA sequences of DNA-binding proteins based on unbound structures

Chen, C. Y., Chien, T. Y., Lin, C. K., Lin, C. W., Weng, Y. Z. & Chang, D. T. H., 2012 Feb 1, In : PloS one. 7, 2, e30446.

Research output: Contribution to journalArticle

19 Citations (Scopus)

Predicting the protein-protein interactions using primary structures with predicted protein surface

Chang, D. T., Syu, Y. T. & Lin, P. C., 2010 Jan 18, In : BMC Bioinformatics. 11, SUPPLL.1, S3.

Research output: Contribution to journalArticle

27 Citations (Scopus)

Prediction of protein secondary structures with a novel kernel density estimation based classifier

Chang, D. T. H., Ou, Y. Y., Hung, H. G., Yang, M. H., Chen, C. Y. & Oyang, Y. J., 2008 Dec 1, In : BMC Research Notes. 1, 51.

Research output: Contribution to journalArticle

6 Citations (Scopus)

ProteMiner-SSM: A web server for efficient analysis of similar protein tertiary substructures

Chang, D. T. H., Chen, C. Y., Chung, W. C., Oyang, Y. J., Juan, H. F. & Huang, H. C., 2004 Jul 1, In : Nucleic acids research. 32, WEB SERVER ISS., p. W76-W82

Research output: Contribution to journalArticle

18 Citations (Scopus)

Protemot: Prediction of protein binding sites with automatically extracted geometrical templates

Chang, D. T. H., Weng, Y. Z., Lin, J. H., Hwang, M. J. & Oyang, Y. J., 2006 Jul 1, In : Nucleic acids research. 34, WEB. SERV. ISS., p. W303-W309

Research output: Contribution to journalArticle

15 Citations (Scopus)

Real value prediction of protein solvent accessibility using enhanced PSSM features

Chang, D. T. H., Huang, H. Y., Syu, Y. T. & Wu, C. P., 2008 Dec 12, In : BMC Bioinformatics. 9, SUPPL. 12, S12.

Research output: Contribution to journalArticle

19 Citations (Scopus)

seeMotif: Exploring and visualizing sequence motifs in 3D structures

Chang, D. T. H., Chien, T. Y. & Chen, C. Y., 2009 Aug 4, In : Nucleic acids research. 37, SUPPL. 2, p. W552-W558

Research output: Contribution to journalArticle

2 Citations (Scopus)

SigUNet: Signal peptide recognition based on semantic segmentation

Wu, J. M., Liu, Y. C. & Chang, D. T. H., 2019 Dec 20, In : BMC Bioinformatics. 20, 677.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Studying disorder-to-order transitions from structural analysis

Chang, T. H., Chiang, C. Y., Lin, F. W. & Fan, C. Y., 2011 Apr 14, 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2011. p. 52-56 5 p. 5729940. (2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using a kernel density estimation based classifier to predict species-specific microRNA precursors

Chang, D. T. H., Wang, C. C. & Chen, J. W., 2008 Dec 12, In : BMC Bioinformatics. 9, SUPPL. 12, S2.

Research output: Contribution to journalArticle

32 Citations (Scopus)

YGA: Identifying distinct biological features between yeast gene sets

Chang, D. T. H., Li, W. S., Bai, Y. H. & Wu, W. S., 2013 Apr 10, In : Gene. 518, 1, p. 26-34 9 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

YPA: An integrated repository of promoter features in Saccharomyces cerevisiae

Chang, D. T. H., Huang, C. Y., Wu, C. Y. & Wu, W. S., 2011 Jan 1, In : Nucleic acids research. 39, SUPPL. 1, p. D647-D652

Research output: Contribution to journalArticle

29 Citations (Scopus)