Projects per year
Personal profile
Education
- 2007 PhD, Dept. of Electrical Engineering, National Tsing Hua University
Research Interests
- Bio-databases
- Bioinformatics
- Bio-web tools
- Computational Systems Biology
Experience
- 2000/08 ~ 2001/7 Full Time TA, Dept. of Electrical Engineering, National Tsing Hua University
- 2007/10 ~ 2009/1 Postdoc, Dept. Ecology and Evolution, University of Chicago
- 2009/02 ~ 2013/07 Assistant Professor, Dept. of Electrical Engineering, National Cheng Kung University
- 2013/08 ~ present Associate Professor, Dept. of Electrical Engineering, National Cheng Kung University
- 2014/07 & 2015/07 Visiting Professor, IWR, University of Heidelberg
- 2014/11 ~ 2016/11 Council Member, Taiwan Evolution and Computational Biology Society
- 2016/07 ~ 2017/02 Visiting Professor, Dept. of Ecology and Evolution, University of Chicago
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Projects
用系統生物方法來研究B型肝病毒感染疾病、肝硬化及肝癌的致病機制，網路生物標記篩選及其藥物標靶預測-子計畫三：使用核醣體分析及人類蛋白體晶片技術來針對B型肝炎病毒感染尋找可藥物攻擊之目標及預測藥物副作用和藥物間協同作用
19-08-01 → 20-07-31
Project: Research project
解決用計算方法預測有合作關係轉錄因子對之研究領域的三大挑戰---找出有預測力的特徵、發展新的演算法及建構網頁資料庫
17-08-01 → 18-07-31
Project: Research project
解決用計算方法預測有合作關係轉錄因子對之研究領域的三大挑戰---找出有預測力的特徵、發展新的演算法及建構網頁資料庫
16-08-01 → 17-07-31
Project: Research project
解決轉錄體學及蛋白體學高通量實驗資料之缺值問題:提出新的缺值填補演算法、發展全面的效能比較平台及建置易用的網頁伺服器
15-08-01 → 16-07-31
Project: Research project
Research Output
PiRTarBase: A database of piRNA targeting sites and their roles in gene regulation
Wu, W. S., Brown, J. S., Chen, T. T., Chu, Y. H., Huang, W. C., Tu, S. & Lee, H. C., 2019 Jan 8, In : Nucleic acids research. 47, D1, p. D181-D187Research output: Contribution to journal › Article
Open Access
4
Citations
(Scopus)
HRPDviewer: Human ribosome profiling data viewer
Wu, W. S., Jiang, Y. X., Chang, J. W., Chu, Y. H., Chiu, Y. H., Tsao, Y. H., Nordling, T. E. M., Tseng, Y. Y. & Tseng, J. T., 2018 Jan 1, In : Database. 2018, 2018Research output: Contribution to journal › Article
1
Citation
(Scopus)
PirScan: A webserver to predict piRNA targeting sites and to avoid transgene silencing in C. elegans
Wu, W. S., Huang, W. C., Brown, J. S., Zhang, D., Song, X., Chen, H., Tu, S., Weng, Z. & Lee, H. C., 2018 Jul 2, In : Nucleic acids research. 46, W1, p. W43-W48Research output: Contribution to journal › Article
6
Citations
(Scopus)
The piRNA targeting rules and the resistance to piRNA silencing in endogenous genes
Zhang, D., Tu, S., Stubna, M., Wu, W-S., Huang, W. C., Weng, Z. & Lee, H. C., 2018 Feb 2, In : Science. 359, 6375, p. 587-592 6 p.Research output: Contribution to journal › Article
39
Citations
(Scopus)
YARG: A repository for arsenic-related genes in yeast
Rathod, J., Tu, H. P., Chang, Y. I., Chu, Y. H., Tseng, Y. Y., Jean, J. S. & Wu, W. S., 2018 Jul, In : PloS one. 13, 7, e0201204.Research output: Contribution to journal › Article
1
Citation
(Scopus)
Thesis
Constructing and analysing transcriptional regulatory networks via graph algorithm-based integration of different genome-wide high-throughput data
Author: 子賢, 楊., 2014 Dec 23Supervisor: Wu, W. (Supervisor)
Student thesis: Doctoral Thesis
iPhos: a web tool to streamline the alkaline phosphatase-assisted LC-MS phosphoproteome investigation
Author: 宏存, 張., 2015 Jun 8Supervisor: Wu, W. (Supervisor)
Student thesis: Master's Thesis
Studying the linkage among co-expression co-regulation co-function co-protein interaction and sequence similarity
Author: 旻良, 魏., 2014 Aug 20Supervisor: Wu, W. (Supervisor)
Student thesis: Master's Thesis
YHMI:酵母菌組蛋白修飾偵測器
Author: 灝平, 杜., 2018 Aug 13Supervisor: Wu, W. (Supervisor)
Student thesis: Master's Thesis
YSGM: an integrative repository of diverse biological features for mining similar genes in yeast
Author: 鐘慶, 王., 2014 Jul 16Supervisor: Wu, W. (Supervisor)
Student thesis: Master's Thesis