Yu-Yun Hsiao

Project Assistant Research Fellow

  • 1072 Citations
  • 20 h-Index
20022019

Research output per year

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Research Output

2019

PePIF1, a P-lineage of PIF-like transposable element identified in protocorm-like bodies of Phalaenopsis orchids

Hsu, C. C., Lai, P. H., Chen, T. C., Tsai, W. C., Hsu, J. L., Hsiao, Y. Y., Wu, W. L., Tsai, C. H., Chen, W. H. & Chen, H. H., 2019 Jan 9, In : BMC genomics. 20, 1, 25.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2017

Post genomics era for orchid research

Tsai, W. C., Dievart, A., Hsu, C. C., Hsiao, Y. Y., Chiou, S. Y., Huang, H. & Chen, H. H., 2017 Dec 1, In : Botanical Studies. 58, 1, 61.

Research output: Contribution to journalReview article

11 Citations (Scopus)

The Apostasia genome and the evolution of orchids

Zhang, G. Q., Liu, K. W., Li, Z., Lohaus, R., Hsiao, Y. Y., Niu, S. C., Wang, J. Y., Lin, Y. C., Xu, Q., Chen, L. J., Yoshida, K., Fujiwara, S., Wang, Z. W., Zhang, Y. Q., Mitsuda, N., Wang, M., Liu, G. H., Pecoraro, L., Huang, H. X., Xiao, X. J. & 15 others, Lin, M., Wu, X. Y., Wu, W. L., Chen, Y. Y., Chang, S. B., Sakamoto, S., Ohme-Takagi, M., Yagi, M., Zeng, S. J., Shen, C. Y., Yeh, C. M., Luo, Y. B., Tsai, W. C., Van De Peer, Y. & Liu, Z. J., 2017 Sep 21, In : Nature. 549, 7672, p. 379-383 5 p.

Research output: Contribution to journalArticle

61 Citations (Scopus)
2016

Genome-wide identification and characterization of TCP genes involved in ovule development of Phalaenopsis equestris

Lin, Y. F., Chen, Y. Y., Hsiao, Y. Y., Shen, C. Y., Hsu, J. L., Yeh, C. M., Mitsuda, N., Ohme-Takagi, M., Liu, Z. J. & Tsai, W. C., 2016 Sep 1, In : Journal of experimental botany. 67, 17, p. 5051-5066 16 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)

The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution

Zhang, G. Q., Xu, Q., Bian, C., Tsai, W. C., Yeh, C. M., Liu, K. W., Yoshida, K., Zhang, L. S., Chang, S. B., Chen, F., Shi, Y., Su, Y. Y., Zhang, Y. Q., Chen, L. J., Yin, Y., Lin, M., Huang, H., Deng, H., Wang, Z. W., Zhu, S. L. & 16 others, Zhao, X., Deng, C., Niu, S. C., Huang, J., Wang, M., Liu, G. H., Yang, H. J., Xiao, X. J., Hsiao, Y. Y., Wu, W. L., Chen, Y. Y., Mitsuda, N., Ohme-Takagi, M., Luo, Y. B., Van De Peer, Y. & Liu, Z. J., 2016 Jan 12, In : Scientific reports. 6, 19029.

Research output: Contribution to journalArticle

68 Citations (Scopus)
2015

Erratum: The genome sequence of the orchid Phalaenopsis equestris (Nature Genetics (2015) 47 (65-72))

Cai, J., Liu, X., Vanneste, K., Proost, S., Tsai, W. C., Liu, K. W., Chen, L. J., He, Y., Xu, Q., Bian, C., Zheng, Z., Sun, F., Liu, W., Hsiao, Y. Y., Pan, Z. J., Hsu, C. C., Yang, Y. P., Hsu, Y. C., Chuang, Y. C., Dievart, A. & 17 others, Dufayard, J. F., Xu, X., Wang, J. Y., Xiao, X. J., Zhao, X. M., Du, R., Zhang, G. Q., Wang, M., Su, Y. Y., Xie, G. C., Liu, G. H., Li, L. Q., Huang, L. Q., Luo, Y. B., Chen, H. H., Van De Peer, Y. & Liu, Z. J., 2015 Jan 1, In : Nature Genetics. 47, 2, 1 p.

Research output: Contribution to journalComment/debate

2 Citations (Scopus)

Erratum: The genome sequence of the orchid Phalaenopsis equestris (Nat. Genet.(2015) 47: (65-72))

Cai, J., Liu, X., Vanneste, K., Proost, S., Tsai, W. C., Liu, K. W., Chen, L. J., He, Y., Xu, Q., Bian, C., Zheng, Z., Sun, F., Liu, W., Hsiao, Y. Y., Pan, Z. J., Hsu, C. C., Yang, Y. P., Hsu, Y. C., Chuang, Y. C., Dievart, A. & 18 others, Dufayard, J. F., Xu, X., Wang, J. Y., Wang, J., Xiao, X. J., Zhao, X. M., Du, R., Zhang, G. Q., Wang, M., Su, Y. Y., Xie, G. C., Liu, G. H., Li, L. Q., Huang, L. Q., Luo, Y. B., Chen, H. H., Van De Peer, Y. & Liu, Z. J., 2015 Feb 25, In : Nature Genetics. 47, 3, 1 p.

Research output: Contribution to journalComment/debate

3 Citations (Scopus)
2014

Evolution and function of MADS-box genes involved in orchid floral development

Tsai, W. C., Pan, Z. J., Hsiao, Y. Y., Chen, L. J. & Liu, Z. J., 2014 Jan 1, In : Journal of Systematics and Evolution. 52, 4, p. 397-410 14 p.

Research output: Contribution to journalReview article

10 Citations (Scopus)
2013

A New Molecular Phylogeny and a New Genus, Pendulorchis, of the Aerides-Vanda Alliance (Orchidaceae: Epidendroideae)

Zhang, G. Q., Liu, K. W., Chen, L. J., Xiao, X. J., Zhai, J. W., Li, L. Q., Cai, J., Hsiao, Y. Y., Rao, W. H., Huang, J., Ma, X. Y., Chung, S. W., Huang, L. Q., Tsai, W. C. & Liu, Z. J., 2013 Apr 5, In : PloS one. 8, 4, e60097.

Research output: Contribution to journalArticle

32 Citations (Scopus)

A New Orchid Genus, Danxiaorchis, and Phylogenetic Analysis of the Tribe Calypsoeae

Zhai, J. W., Zhang, G. Q., Chen, L. J., Xiao, X. J., Liu, K. W., Tsai, W. C., Hsiao, Y. Y., Tian, H. Z., Zhu, J. Q., Wang, M. N., Wang, F. G., Xing, F. W. & Liu, Z. J., 2013 Apr 4, In : PloS one. 8, 4, e60371.

Research output: Contribution to journalArticle

21 Citations (Scopus)

ESTs Analysis Reveals Putative Genes Involved in Symbiotic Seed Germination in Dendrobium officinale

Zhao, M. M., Zhang, G., Zhang, D. W., Hsiao, Y. Y. & Guo, S. X., 2013 Aug 13, In : PloS one. 8, 8, e72705.

Research output: Contribution to journalArticle

Open Access
44 Citations (Scopus)

OrchidBase 2.0: Comprehensive collection of orchidaceae floral transcriptomes

Tsai, W. C., Fu, C. H., Hsiao, Y. Y., Huang, Y. M., Chen, L. J., Wang, M., Liu, Z. J. & Chen, H. H., 2013 Feb 1, In : Plant and Cell Physiology. 54, 2, p. e7

Research output: Contribution to journalArticle

45 Citations (Scopus)

Transcriptomic analysis of floral organs from Phalaenopsis orchid by using oligonucleotide microarray

Hsiao, Y. Y., Huang, T. H., Fu, C. H., Huang, S. C., Chen, Y. J., Huang, Y. M., Chen, W. H., Tsai, W. C. & Chen, H. H., 2013 Apr 10, In : Gene. 518, 1, p. 91-100 10 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)
2012

C-and D-class MADS-box genes from phalaenopsis equestris (orchidaceae) display functions in gynostemium and ovule development

Chen, Y. Y., Lee, P. F., Hsiao, Y. Y., Wu, W. L., Pan, Z. J., Lee, Y. I., Liu, K. W., Chen, L. J., Liu, Z. J. & Tsai, W. C., 2012 Jun 1, In : Plant and Cell Physiology. 53, 6, p. 1053-1067 15 p.

Research output: Contribution to journalArticle

33 Citations (Scopus)

Predicted disappearance of Cephalantheropsis obcordata in luofu mountain due to changes in rainfall patterns

Xiao, X. J., Liu, K. W., Zheng, Y. Y., Zhang, Y. T., Tsai, W. C., Hsiao, Y. Y., Zhang, G. Q., Chen, L. J. & Liu, Z. J., 2012 Jan 10, In : PloS one. 7, 1, e29718.

Research output: Contribution to journalArticle

3 Citations (Scopus)

The Anther steps onto the Stigma for self-fertilization in a slipper orchid

Chen, L. J., Liu, K. W., Xiao, X. J., Tsai, W. C., Hsiao, Y. Y., Huang, J. & Liu, Z. J., 2012 May 23, In : PloS one. 7, 5, e37478.

Research output: Contribution to journalArticle

7 Citations (Scopus)
2011

An overview of the Phalaenopsis orchid genome through BAC end sequence analysis

Hsu, C. C., Chung, Y. L., Chen, T. C., Lee, Y. L., Kuo, Y. T., Tsai, W. C., Hsiao, Y. Y., Chen, Y. W., Wu, W. L. & Chen, H. H., 2011 Jan 6, In : BMC Plant Biology. 11, 3.

Research output: Contribution to journalArticle

39 Citations (Scopus)

Biosynthetic regulation of floral scent in phalaenopsis

Hsiao, Y. Y., Tsai, W. C., Che, W. H. & Chen, H. H., 2011 Jan 1, Orchid Biotechnology II. World Scientific Publishing Co., p. 145-180 36 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)

Duplicated C-Class MADS-Box genes reveal distinct roles in gynostemium development in cymbidium ensifolium (Orchidaceae)

Wang, S. Y., Lee, P. F., Lee, Y. I., Hsiao, Y. Y., Chen, Y. Y., Pan, Z. J., Liu, Z. J. & Tsai, W. C., 2011 Mar 1, In : Plant and Cell Physiology. 52, 3, p. 563-577 15 p.

Research output: Contribution to journalArticle

37 Citations (Scopus)

Gene discovery using next-generation pyrosequencing to develop ESTs for Phalaenopsis orchids

Hsiao, Y. Y., Chen, Y. W., Huang, S. C., Pan, Z. J., Fu, C. H., Chen, W. H., Tsai, W. C. & Chen, H. H., 2011 Apr 12, In : BMC genomics. 12, 360.

Research output: Contribution to journalArticle

42 Citations (Scopus)

OrchidBase: A collection of sequences of the transcriptome derived from orchids

Fu, C. H., Chen, Y. W., Hsiao, Y. Y., Pan, Z. J., Liu, Z. J., Huang, Y. M., Tsai, W. C. & Chen, H. H., 2011 Feb 1, In : Plant and Cell Physiology. 52, 2, p. 238-243 6 p.

Research output: Contribution to journalArticle

59 Citations (Scopus)

Paraholcoglossum and Tsiorchis, two new orchid genera established by molecular and morphological analyses of the Holcoglossum alliance

Liu, Z. J., Chen, L. J., Chen, S. C., Cai, J., Tsai, W. C., Hsiao, Y. Y., Rao, W. H., Ma, X. Y. & Zhang, G. Q., 2011 Oct 10, In : PloS one. 6, 10, e24864.

Research output: Contribution to journalArticle

20 Citations (Scopus)

Research on orchid biology and biotechnology

Hsiao, Y. Y., Pan, Z. J., Hsu, C. C., Yang, Y. P., Hsu, Y. C., Chuang, Y. C., Shih, H. H., Chen, W. H., Tsai, W. C. & Chen, H. H., 2011 Sep 1, In : Plant and Cell Physiology. 52, 9, p. 1467-1486 20 p.

Research output: Contribution to journalReview article

53 Citations (Scopus)

The relationship between ethylene and orchid ovule development

Tsai, W. C., Hsiao, Y. Y., Pan, Z. J., Chen, Y. W. & Chen, H. H., 2011 Jan 1, Orchid Biotechnology II. World Scientific Publishing Co., p. 229-251 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2010

A novel functional geranyl diphosphate synthase for scent production in phalaenopsis bellina flowers

Hsiao, Y. Y., Tsai, W. C., Chen, H. H. & Chen, W. H., 2010 Oct 29, I International Orchid Symposium. p. 481-488 8 p. (Acta Horticulturae; vol. 878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Molecular mechanisms underlying orchid floral morphogenesis

Tsai, W. C., Hsiao, Y. Y., Pan, Z. J. & Chen, H. H., 2010 Oct 29, I International Orchid Symposium. p. 115-124 10 p. (Acta Horticulturae; vol. 878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)
2008

A novel homodimeric geranyl diphosphate synthase from the orchid Phalaenopsis bellina lacking a DD(X)2-4D motif

Hsiao, Y. Y., Jeng, M. F., Tsai, W. C., Chuang, Y. C., Li, C. Y., Wu, T-S., Kuoh, C. S., Chen, W. H. & Chen, H. H., 2008 Sep 1, In : Plant Journal. 55, 5, p. 719-733 15 p.

Research output: Contribution to journalArticle

53 Citations (Scopus)

Chapter 3 Molecular Biology of Orchid Flowers. With Emphasis on Phalaenopsis

Tsai, W. C., Hsiao, Y. Y., Pan, Z. J., Hsu, C. C., Yang, Y. P., Chen, W. H. & Chen, H. H., 2008 Aug 12, Incorporating Advances in Plant Pathology. Kader, J-C. & Delseny, M. (eds.). p. 99-145 47 p. (Advances in Botanical Research; vol. 47).

Research output: Chapter in Book/Report/Conference proceedingChapter

18 Citations (Scopus)

Differential gene expression analysis by cDNA-AFLP between flower buds of Phalaenopsis Hsiang Fei cv. H. F. and its somaclonal variant

Hsu, T. W., Tsai, W. C., Wang, D. P., Lin, S., Hsiao, Y. Y., Chen, W. H. & Chen, H. H., 2008 Sep 1, In : Plant Science. 175, 3, p. 415-422 8 p.

Research output: Contribution to journalArticle

16 Citations (Scopus)

Interactions of B-class complex proteins involved in tepal development in Phalaenopsis orchid

Tsai, W. C., Pan, Z. J., Hsiao, Y. Y., Jeng, M. F., Wu, T. F., Chen, W. H. & Chen, H. H., 2008 May 1, In : Plant and Cell Physiology. 49, 5, p. 814-824 11 p.

Research output: Contribution to journalArticle

43 Citations (Scopus)

The role of ethylene in orchid ovule development

Tsai, W. C., Hsiao, Y. Y., Pan, Z. J., Kuoh, C. S., Chen, W. H. & Chen, H. H., 2008 Jul 1, In : Plant Science. 175, 1-2, p. 98-105 8 p.

Research output: Contribution to journalArticle

25 Citations (Scopus)
2007

Analysis of expression of Phalaenopsis floral ESTs

Tsai, W. C., Hsiao, Y. Y., Pan, Z. J. & Chen, H. H., 2007 Jan 1, Orchid Biotechnology. World Scientific Publishing Co., p. 145-164 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Citation (Scopus)
2006

Comparison of transcripts in Phalaenopsis bellina and Phalaenopsis equestris (Orchidaceae) flowers to deduce monoterpene biosynthesis pathway

Hsiao, Y. Y., Tsai, W. C., Kuoh, C. S., Huang, T. H., Wang, H. C., Wu, T. S., Leu, Y. L., Chen, W. H. & Chen, H. H., 2006 Jul 13, In : BMC Plant Biology. 6, 14.

Research output: Contribution to journalArticle

68 Citations (Scopus)

Expression analysis of the ESTs derived from the flower buds of Phalaenopsis equestris

Tsai, W. C., Hsiao, Y. Y., Lee, S. H., Tung, C. W., Wang, D. P., Wang, H. C., Chen, W. H. & Chen, H. H., 2006 Mar 1, In : Plant Science. 170, 3, p. 426-432 7 p.

Research output: Contribution to journalArticle

41 Citations (Scopus)
2005

KSPF: Using gene sequence patterns and data mining for biological knowledge management

Wang, H. C., Kuo, H. C., Chen, H. H., Hsiao, Y. Y. & Tsai, W. C., 2005 Apr, In : Expert Systems With Applications. 28, 3, p. 537-545 9 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

PeMADS6, a GLOBOSA/PISTILLATA-like gene in Phalaenopsis equestris involved in petaloid formation, and correlated with flower longevity and ovary development

Tsai, W. C., Lee, P. F., Chen, H. I., Hsiao, Y. Y., Wei, W. J., Pan, Z. J., Chuang, M. H., Kuoh, C. S., Chen, W. H. & Chen, H. H., 2005 Jul 1, In : Plant and Cell Physiology. 46, 7, p. 1125-1139 15 p.

Research output: Contribution to journalArticle

107 Citations (Scopus)
2002

Analysis of the complete genome sequence of the Hz-1 virus suggests that it is related to members of the Baculoviridae

Cheng, C. H., Liu, S. M., Chow, T. Y., Hsiao, Y. Y., Wang, D. P., Huang, J. J. & Chen, H. H., 2002 Sep 1, In : Journal of Virology. 76, 18, p. 9024-9034 11 p.

Research output: Contribution to journalArticle

65 Citations (Scopus)