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  • Yu Shyr
2016

Diverse, biologically relevant, and targetable gene rearrangements in triple-negative breast cancer and other malignancies

Shaver, T. M., Lehmann, B. D., Beeler, J. S., Li, C. I., Li, Z., Jin, H., Stricker, T. P., Shyr, Y. & Pietenpol, J. A., 2016 Aug 15, In : Cancer Research. 76, 16, p. 4850-4860 11 p.

Research output: Contribution to journalArticle

20 Citations (Scopus)

Performance investigation of proteomic identification by HCD/CID fragmentations in combination with high/low-resolution detectors on a tribrid, high-field Orbitrap instrument

Tu, C., Li, J., Shen, S., Sheng, Q., Shyr, Y. & Qu, J., 2016 Jul, In : PloS one. 11, 7, e0160160.

Research output: Contribution to journalArticle

Open Access
12 Citations (Scopus)
2019

Extramedullary leukemia behaving as solid cancer: clinical, histologic, and genetic clues to chemoresistance in organ sites

Cunningham, I., Hamele-Bena, D., Guo, Y., Shiomi, T., Papp, A. C., Chakravarti, B., Yang, J., Shyr, Y. & Fisher, R. A., 2019 Nov 1, In : American Journal of Hematology. 94, 11, p. 1200-1207 8 p.

Research output: Contribution to journalArticle

2016
2 Citations (Scopus)

Mitochondria sequence mapping strategies and practicability of mitochondria variant detection from exome and RNA sequencing data

Zhang, P., Samuels, D. C., Lehmann, B., Stricker, T., Pietenpol, J., Shyr, Y. & Guo, Y., 2016 Mar 1, In : Briefings in bioinformatics. 17, 2, p. 224-232 9 p.

Research output: Contribution to journalArticle

Open Access
10 Citations (Scopus)

P73 Is Required for Multiciliogenesis and Regulates the Foxj1-Associated Gene Network

Marshall, C. B., Mays, D. J., Beeler, J. S., Rosenbluth, J. M., Boyd, K. L., Santos Guasch, G. L., Shaver, T. M., Tang, L. J., Liu, Q., Shyr, Y., Venters, B. J., Magnuson, M. A. & Pietenpol, J. A., 2016 Mar 15, In : Cell Reports. 14, 10, p. 2289-2300 12 p.

Research output: Contribution to journalArticle

Open Access
51 Citations (Scopus)
2020

What Constitutes a Valid Surrogate End Point in Cancer Clinical Trials?

Shyr, Y. & Shyr, D., 2020 Sep, In : JAMA Oncology. 6, 9, p. 1334-1335 2 p.

Research output: Contribution to journalEditorial

2017

Functional data classification using covariate-adjusted subspace projection

Li, P. L., Chiou, J. M. & Shyr, Y., 2017 Nov, In : Computational Statistics and Data Analysis. 115, p. 21-34 14 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)
2020

Integrated Omics of Metastatic Colorectal Cancer

Li, C., Sun, Y. D., Yu, G. Y., Cui, J. R., Lou, Z., Zhang, H., Huang, Y., Bai, C. G., Deng, L. L., Liu, P., Zheng, K., Wang, Y. H., Wang, Q. Q., Li, Q. R., Wu, Q. Q., Liu, Q., Shyr, Y., Li, Y. X., Chen, L. N., Wu, J. R. & 2 others, Zhang, W. & Zeng, R., 2020, (Accepted/In press) In : Cancer Cell.

Research output: Contribution to journalArticle

2017

Identification of active miRNA promoters from nuclear run-on RNA sequencing

Liu, Q., Wang, J., Zhao, Y., Li, C. I., Stengel, K. R., Acharya, P., Johnston, G., Hiebert, S. W. & Shyr, Y., 2017 Jul 1, In : Nucleic acids research. 45, 13, e121.

Research output: Contribution to journalArticle

11 Citations (Scopus)
2016

Practicability of detecting somatic point mutation from RNA high throughput sequencing data

Sheng, Q., Zhao, S., Li, C. I., Shyr, Y. & Guo, Y., 2016 May 1, In : Genomics. 107, 5, p. 163-169 7 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)
2017

Power and sample size calculations for high-throughput sequencing-based experiments

Li, C. I., Samuels, D. C., Zhao, Y. Y., Shyr, Y. & Guo, Y., 2017 May 30, In : Briefings in bioinformatics. 19, 6, p. 1247-1255 9 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)
2016

Non-invasive imaging of oxygen extraction fraction in adults with sickle cell anaemia

Jordan, L. C., Gindville, M. C., Scott, A. O., Juttukonda, M. R., Strother, M. K., Kassim, A. A., Chen, S. C., Lu, H., Pruthi, S., Shyr, Y. & Donahue, M. J., 2016 Mar 1, In : Brain. 139, 3, p. 738-750 13 p.

Research output: Contribution to journalArticle

Open Access
54 Citations (Scopus)
2018

The impact of smoking and tp53 mutations in lung adenocarcinoma patients with targetable mutations—the lung cancer mutation consortium (LCMC2)

Aisner, D. L., Sholl, L. M., Berry, L. D., Rossi, M. R., Chen, H., Fujimoto, J., Moreira, A. L., Ramalingam, S. S., Villaruz, L. C., Otterson, G. A., Haura, E., Politi, K., Glisson, B., Cetnar, J., Garon, E. B., Schiller, J., Waqar, S. N., Sequist, L. V., Brahmer, J., Shyr, Y. & 7 others, Kugler, K., Wistuba, I. I., Johnson, B. E., Minna, J. D., Kris, M. G., Bunn, P. A. & Kwiatkowski, D. J., 2018 Mar 1, In : Clinical Cancer Research. 24, 5, p. 1038-1047 10 p.

Research output: Contribution to journalArticle

65 Citations (Scopus)
2016

Clinical and Biological Insights Into Combined Post- and Pre-Capillary Pulmonary Hypertension

Assad, T. R., Hemnes, A. R., Larkin, E. K., Glazer, A. M., Xu, M., Wells, Q. S., Farber-Eger, E. H., Sheng, Q., Shyr, Y., Harrell, F. E., Newman, J. H. & Brittain, E. L., 2016 Dec 13, In : Journal of the American College of Cardiology. 68, 23, p. 2525-2536 12 p.

Research output: Contribution to journalArticle

Open Access
70 Citations (Scopus)
2018

Longitudinal Cell-Free DNA Analysis in Patients with Small Cell Lung Cancer Reveals Dynamic Insights into Treatment Efficacy and Disease Relapse

Almodovar, K., Iams, W. T., Meador, C. B., Zhao, Z., York, S., Horn, L., Yan, Y., Hernandez, J., Chen, H., Shyr, Y., Lim, L. P., Raymond, C. K. & Lovly, C. M., 2018 Jan, In : Journal of Thoracic Oncology. 13, 1, p. 112-123 12 p.

Research output: Contribution to journalArticle

Open Access
30 Citations (Scopus)
2017

Integrated molecular analysis reveals complex interactions between genomic and epigenomic alterations in esophageal adenocarcinomas

Peng, D., Guo, Y., Chen, H., Zhao, S., Washington, K., Hu, T., Shyr, Y. & El-Rifai, W., 2017 Jan 19, In : Scientific reports. 7, 40729.

Research output: Contribution to journalArticle

Open Access
9 Citations (Scopus)
2019

Systems Biology Analyses Show Hyperactivation of Transforming Growth Factor-β and JNK Signaling Pathways in Esophageal Cancer

Blum, A. E., Venkitachalam, S., Ravillah, D., Chelluboyina, A. K., Kieber-Emmons, A. M., Ravi, L., Kresak, A., Chandar, A. K., Markowitz, S. D., Canto, M. I., Wang, J. S., Shaheen, N. J., Guo, Y., Shyr, Y., Willis, J. E., Chak, A., Varadan, V. & Guda, K., 2019 May, In : Gastroenterology. 156, 6, p. 1761-1774 14 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)
2018

Bioinformatic analysis of endogenous and exogenous small RNAs on lipoproteins

Allen, R. M., Zhao, S., Ramirez Solano, M. A., Zhu, W., Michell, D. L., Wang, Y., Shyr, Y., Sethupathy, P., Linton, M. F., Graf, G. A., Sheng, Q. & Vickers, K. C., 2018 Jan 1, In : Journal of Extracellular Vesicles. 7, 1, 1506198.

Research output: Contribution to journalArticle

Open Access
14 Citations (Scopus)

Quantitative assessment of cell population diversity in single-cell landscapes

Liu, Q., Herring, C. A., Sheng, Q., Ping, J., Simmons, A. J., Chen, B., Banerjee, A., Li, W., Gu, G., Coffey, R. J., Shyr, Y. & Lau, K. S., 2018 Oct, In : PLoS biology. 16, 10, e2006687.

Research output: Contribution to journalArticle

Open Access
12 Citations (Scopus)
2017

Feasibility trial for primary stroke prevention in children with sickle cell anemia in Nigeria (SPIN trial)

Galadanci, N. A., Umar Abdullahi, S., Vance, L. D., Musa Tabari, A., Ali, S., Belonwu, R., Salihu, A., Amal Galadanci, A., Wudil Jibir, B., Bello-Manga, H., Neville, K., Kirkham, F. J., Shyr, Y., Phillips, S., Covert, B. V., Kassim, A. A., Jordan, L. C., Aliyu, M. H. & DeBaun, M. R., 2017 Aug, In : American Journal of Hematology. 92, 8, p. 780-788 9 p.

Research output: Contribution to journalArticle

Open Access
22 Citations (Scopus)
2019

Aberrant FGFR signaling mediates resistance to CDK4/6 inhibitors in ER+ breast cancer

Formisano, L., Lu, Y., Servetto, A., Hanker, A. B., Jansen, V. M., Bauer, J. A., Sudhan, D. R., Guerrero-Zotano, A. L., Croessmann, S., Guo, Y., Ericsson, P. G., Lee, K. M., Nixon, M. J., Schwarz, L. J., Sanders, M. E., Dugger, T. C., Cruz, M. R., Behdad, A., Cristofanilli, M., Bardia, A. & 11 others, O’Shaughnessy, J., Nagy, R. J., Lanman, R. B., Solovieff, N., He, W., Miller, M., Su, F., Shyr, Y., Mayer, I. A., Balko, J. M. & Arteaga, C. L., 2019 Dec 1, In : Nature communications. 10, 1, 1373.

Research output: Contribution to journalArticle

Open Access
41 Citations (Scopus)
2018

Treatment options in idiopathic subglottic stenosis: Protocol for a prospective international multicentre pragmatic trial

Gelbard, A., Shyr, Y., Berry, L., Hillel, A. T., Ekbom, D. C., Edell, E. S., Kasperbauer, J. L., Lott, D. G., Donovan, D. T., Garrett, C. G., Sandhu, G., Daniero, J. J., Netterville, J. L., Schindler, J. S., Smith, M. E., Bryson, P. C., Lorenz, R. R. & Francis, D. O., 2018 Apr 1, In : BMJ open. 8, 4, e022243.

Research output: Contribution to journalArticle

6 Citations (Scopus)
2017

Multi-perspective quality control of Illumina RNA sequencing data analysis

Sheng, Q., Vickers, K., Zhao, S., Wang, J., Samuels, D. C., Koues, O., Shyr, Y. & Guo, Y., 2017, In : Briefings in functional genomics. 16, 4, p. 194-204 11 p.

Research output: Contribution to journalArticle

Open Access
23 Citations (Scopus)

Multisite external validation of a risk prediction model for the diagnosis of blood stream infections in febrile pediatric oncology patients without severe neutropenia

Esbenshade, A. J., Zhao, Z., Aftandilian, C., Saab, R., Wattier, R. L., Beauchemin, M., Miller, T. P., Wilkes, J. J., Kelly, M. J., Fernbach, A., Jeng, M., Schwartz, C. L., Dvorak, C. C., Shyr, Y., Moons, K. G. M., Sulis, M. L. & Friedman, D. L., 2017 Oct 1, In : Cancer. 123, 19, p. 3781-3790 10 p.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)
2018

LNK deficiency promotes acute aortic dissection and rupture

Laroumanie, F., Korneva, A., Bersi, M. R., Alexander, M. R., Xiao, L., Zhong, X., Van Beusecum, J. P., Chen, Y., Saleh, M. A., McMaster, W. G., Gavulic, K. A., Dale, B. L., Zhao, S., Guo, Y., Shyr, Y., Perrien, D. S., Cox, N. J., Curci, J. A., Humphrey, J. D. & Madhur, M. S., 2018 Oct 18, In : JCI Insight. 3, 20

Research output: Contribution to journalArticle

Open Access
6 Citations (Scopus)
2020

TBCRC 032 IB/II Multicenter Study: Molecular Insights to AR Antagonist and PI3K Inhibitor Efficacy in Patients with AR+ Metastatic Triple-Negative Breast Cancer

Translational Breast Cancer Research Consortium, 2020 May 1, In : Clinical Cancer Research. 26, 9, p. 2111-2123 13 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)
2019

Human PAH is characterized by a pattern of lipid-related insulin resistance

Hemnes, A. R., Luther, J. M., Rhodes, C. J., Burgess, J. P., Carlson, J., Fan, R., Fessel, J. P., Fortune, N., Gerszten, R. E., Halliday, S. J., Hekmat, R., Howard, L., Newman, J. H., Niswender, K. D., Pugh, M. E., Robbins, I. M., Sheng, Q., Shibao, C. A., Shyr, Y., Sumner, S. & 7 others, Talati, M., Wharton, J., Wilkins, M. R., Ye, F., Yu, C., West, J. & Brittain, E. L., 2019 Jan 10, In : JCI Insight. 4, 1

Research output: Contribution to journalArticle

Open Access
14 Citations (Scopus)
2020

Bayesian Inference of Lymph Node Ratio Estimation and Survival Prognosis for Breast Cancer Patients

Teng, J., Abdygametova, A., Du, J., Ma, B., Zhou, R., Shyr, Y. & Ye, F., 2020 Feb, In : IEEE Journal of Biomedical and Health Informatics. 24, 2, p. 354-364 11 p., 8847382.

Research output: Contribution to journalArticle

1 Citation (Scopus)

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

Human Tumor Atlas Network, 2020 Apr 16, In : Cell. 181, 2, p. 236-249 14 p.

Research output: Contribution to journalReview article

Open Access
4 Citations (Scopus)

Targeting MYCN-expressing triple-negative breast cancer with BET and MEK inhibitors

Schafer, J. M., Lehmann, B. D., Gonzalez-Ericsson, P. I., Marshall, C. B., Beeler, J. S., Redman, L. N., Jin, H., Sanchez, V., Stubbs, M. C., Scherle, P., Johnson, K. N., Sheng, Q., Roland, J. T., Bauer, J. A., Shyr, Y., Chakravarthy, B., Mobley, B. C., Hiebert, S. W., Balko, J. M., Sanders, M. E. & 2 others, Liu, P. C. C. & Pietenpol, J. A., 2020 Mar 11, In : Science translational medicine. 12, 534

Research output: Contribution to journalArticle

2 Citations (Scopus)

Clinical impact of COVID-19 on patients with cancer (CCC19): a cohort study

COVID-19 and Cancer Consortium, 2020 Jun 20, In : The Lancet. 395, 10241, p. 1907-1918 12 p.

Research output: Contribution to journalArticle

Open Access

Comparative treatment outcomes for patients with idiopathic subglottic stenosis

Gelbard, A., Anderson, C., Berry, L. D., Amin, M. R., Benninger, M. S., Blumin, J. H., Bock, J. M., Bryson, P. C., Castellanos, P. F., Chen, S. C., Clary, M. S., Cohen, S. M., Crawley, B. K., Dailey, S. H., Daniero, J. J., De Alarcon, A., Donovan, D. T., Edell, E. S., Ekbom, D. C., Fernandes-Taylor, S. & 55 others, Fink, D. S., Franco, R. A., Garrett, C. G., Guardiani, E. A., Hillel, A. T., Hoffman, H. T., Hogikyan, N. D., Howell, R. J., Huang, L. C., Hussain, L. K., Johns, M. M., Kasperbauer, J. L., Khosla, S. M., Kinnard, C., Kupfer, R. A., Langerman, A. J., Lentz, R. J., Lorenz, R. R., Lott, D. G., Lowery, A. S., Makani, S. S., Maldonado, F., Mannion, K., Matrka, L., McWhorter, A. J., Merati, A. L., Mori, M. C., Netterville, J. L., ODell, K., Ongkasuwan, J., Postma, G. N., Reder, L. S., Rohde, S. L., Richardson, B. E., Rickman, O. B., Rosen, C. A., Rutter, M. J., Sandhu, G. S., Schindler, J. S., Schneider, G. T., Shah, R. N., Sikora, A. G., Sinard, R. J., Smith, M. E., Smith, L. J., Soliman, A. M. S., Sveinsdóttir, S., Van Daele, D. J., Veivers, D., Verma, S. P., Weinberger, P. M., Weissbrod, P. A., Wootten, C. T., Shyr, Y. & Francis, D. O., 2020 Jan, In : JAMA Otolaryngology - Head and Neck Surgery. 146, 1, p. 20-29 10 p.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)
2018

Proteome analysis implicates adaptive changes in metabolism and body wall musculature of Caenorhabditis elegans Dauer Larva

Zaidi, A. K., Vukoti, K., Sheng, Q., Shyr, Y. & Miyagi, M., 2018 Jun, In : Journal of Integrated OMICS. 8, 1, p. 46-53 8 p., 237.

Research output: Contribution to journalArticle

2016

A novel resistance mutation in eccC5 of the ESX-5 secretion system confers ofloxacin resistance in Mycobacterium tuberculosis

Eilertson, B., Maruri, F., Blackman, A., Guo, Y., Herrera, M., van der Heijden, Y., Shyr, Y. & Sterling, T. R., 2016 Sep 1, In : The Journal of antimicrobial chemotherapy. 71, 9, p. 2419-2427 9 p.

Research output: Contribution to journalArticle

Open Access
4 Citations (Scopus)

Effects of combination PPARγ agonist and angiotensin receptor blocker on glomerulosclerosis

Matsushita, K., Yang, H. C., Mysore, M. M., Zhong, J., Shyr, Y., Ma, L. J. & Fogo, A. B., 2016 Jun 1, In : Laboratory Investigation. 96, 6, p. 602-609 8 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)
2020

Kidney Stone History and Adverse Outcomes After Percutaneous Coronary Intervention

Lai, C. H., Huang, L. C., Holby, S. N., Lai, Y. J., Su, P. F., Cheng, Y. S., Shyr, Y. & Hsi, R. S., 2020 Feb, In : Urology. 136, p. 75-81 7 p.

Research output: Contribution to journalArticle

2018

Erratum to: Feasibility trial for primary stroke prevention in children with sickle cell anemia in Nigeria (SPIN trial) (American Journal of Hematology, (2017), 92, 8, (780-788), 10.1002/ajh.24770)

Galadanci, N. A., Umar Abdullahi, S., Vance, L. D., Musa Tabari, A., Ali, S., Belonwu, R., Salihu, A., Amal Galadanci, A., Wudil Jibir, B., Bello-Manga, H., Neville, K., Kirkham, F. J., Shyr, Y., Phillips, S., Covert, B. V., Kassim, A. A., Jordan, L. C., Aliyu, M. H. & DeBaun, M. R., 2018 Mar, In : American Journal of Hematology. 93, 3, p. E83

Research output: Contribution to journalComment/debate

Open Access
2017

Bivariate Poisson models with varying offsets: An application to the paired mitochondrial DNA dataset

Su, P. F., Mau, Y. L., Guo, Y., Li, C. I., Liu, Q., Boice, J. D. & Shyr, Y., 2017 Mar 1, In : Statistical Applications in Genetics and Molecular Biology. 16, 1, p. 47-58 12 p.

Research output: Contribution to journalArticle

Corrigendum to "Comparative Study of Exome Copy Number Variation Estimation Tools Using Array Comparative Genomic Hybridization as Control"

Guo, Y., Sheng, Q., Samuels, D. C., Lehmann, B., Bauer, J. A., Pietenpol, J. & Shyr, Y., 2017 Jan 1, In : BioMed research international. 2017, p. 7409598 1 p.

Research output: Contribution to journalComment/debate

Open Access
2018

Design and conduct of clinical trials for breast cancer

Klimberg, V. S., Shyr, Y. & Wells, T., 2018 Jan 1, The Breast: Comprehensive Management of Benign and Malignant Diseases. Elsevier Inc., p. 362-376.e1

Research output: Chapter in Book/Report/Conference proceedingChapter

2017

Implementing a standard-of-care clinic for stroke prevention in children with sickle cell disease in Nigeria: A feasible strategy outside a clinical trial setting

Galadanci, N. A., Abdullahi, S. U., Vance, L. D., Tabari, M. A., Abubakar, S., Belonwu, R., Salihu, A., Galadanci, A. A., Jibir, B. W., Gambo, S., Suwaid, S., Bello-Manga, H., Neville, K., Kirkham, F., Shyr, Y., Phillips, S., Covert, B. V., Kassim, A. A., Trevathan, E., Jordan, L. C. & 2 others, Aliyu, M. H. & DeBaun, M. R., 2017 Dec 8, In : Blood Advances. 1, p. 23-25 3 p.

Research output: Contribution to journalShort survey

Open Access
2019

Erratum for the research article: Genomic proling of ER+ breast cancers after short-term estrogen suppression reveals alterations associated with endocrine resistance (Science Translational Medicine DOI: 10.1126/scitranslmed.aai7993)

Giltnane, J. M., Hutchinson, K. E., Stricker, T. P., Formisano, L., Young, C. D., Estrada, M. V., Nixon, M. J., Du, L., Sanchez, V., Ericsson, P. G., Kuba, M. G., Sanders, M. E., Mu, X. J., Van Allen, E. M., Wagle, N., Mayer, I. A., Abramson, V., Gόmez, H., Rizzo, M., Toy, W. & 15 others, Chandarlapaty, S., Mayer, E. L., Christiansen, J., Murphy, D., Fitzgerald, K., Wang, K., Ross, J. S., Miller, V. A., Stephens, P. J., Yelensky, R., Garraway, L., Shyr, Y., Meszoely, I., Balko, J. M. & Arteaga, C. L., 2019 Feb 13, In : Science translational medicine. 11, 479, eaaw7620.

Research output: Contribution to journalComment/debate

2020

Immune-Related Adverse Events and Immune Checkpoint Inhibitor Efficacy in Patients with Gastrointestinal Cancer with Food and Drug Administration-Approved Indications for Immunotherapy

Das, S., Ciombor, K. K., Haraldsdottir, S., Pumpalova, Y., Sahin, I. H., Pineda, G., Shyr, Y., Lin, E. P., Hsu, C. Y., Chu, S. K., Goff, L. W., Cardin, D. B., Bilen, M. A., Fisher, G. A., Wu, C. & Berlin, J., 2020 Aug 1, In : Oncologist. 25, 8, p. 669-679 11 p.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)
2016

Refinement of triple-negative breast cancer molecular subtypes: Implications for neoadjuvant chemotherapy selection

Lehmann, B. D., Jovanović, B., Chen, X., Estrada, M. V., Johnson, K. N., Shyr, Y., Moses, H. L., Sanders, M. E. & Pietenpol, J. A., 2016 Jun, In : PloS one. 11, 6, e0157368.

Research output: Contribution to journalArticle

Open Access
310 Citations (Scopus)
2018

Dynamics of Zebrafish Heart Regeneration Using an HPLC-ESI-MS/MS Approach

Ma, D., Tu, C., Sheng, Q., Yang, Y., Kan, Z., Guo, Y., Shyr, Y., Scott, I. C. & Lou, X., 2018 Mar 2, In : Journal of Proteome Research. 17, 3, p. 1300-1308 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)
2017

A peptide-retrieval strategy enables significant improvement of quantitative performance without compromising confidence of identification

Tu, C., Shen, S., Sheng, Q., Shyr, Y. & Qu, J., 2017 Jan 30, In : Journal of Proteomics. 152, p. 276-282 7 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Shanghai score: A prognostic and adjuvant treatment-evaluating system constructed for Chinese patients with hepatocellular carcinoma after curative resection

Sun, H. C., Xie, L., Yang, X. R., Li, W., Yu, J., Zhu, X. D., Xia, Y., Zhang, T., Xu, Y., Hu, B., Du, L. P., Zeng, L. Y., Ouyang, J., Zhang, W., Song, T. Q., Li, Q., Shi, Y. H., Zhou, J., Qiu, S. J., Liu, Q. & 5 others, Li, Y. X., Tang, Z. Y., Shyr, Y., Shen, F. & Fan, J., 2017 Nov 20, In : Chinese Medical Journal. 130, 22, p. 2650-2660 11 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)
2018

Nascent RNA sequencing analysis provides insights into enhancer-mediated gene regulation

Wang, J., Zhao, Y., Zhou, X., Hiebert, S. W., Liu, Q. & Shyr, Y., 2018 Aug 23, In : BMC genomics. 19, 1, 633.

Research output: Contribution to journalArticle

Open Access
8 Citations (Scopus)
2017

Genomic profiling of ER+ breast cancers after short-term estrogen suppression reveals alterations associated with endocrine resistance

Giltnane, J. M., Hutchinson, K. E., Stricker, T. P., Formisano, L., Young, C. D., Estrada, M. V., Nixon, M. J., Du, L., Sanchez, V., Ericsson, P. G., Kuba, M. G., Sanders, M. E., Mu, X. J., Van Allen, E. M., Wagle, N., Mayer, I. A., Abramson, V., Gómez, H., Rizzo, M., Toy, W. & 15 others, Chandarlapaty, S., Mayer, E. L., Christiansen, J., Murphy, D., Fitzgerald, K., Wang, K., Ross, J. S., Miller, V. A., Stephens, P. J., Yelensky, R., Garraway, L., Shyr, Y., Meszoely, I., Balko, J. M. & Arteaga, C. L., 2017 Aug 9, In : Science translational medicine. 9, 402, aai7993.

Research output: Contribution to journalArticle

Open Access
32 Citations (Scopus)