A novel method for mining temporally dependent association rules in three-dimensional microarray datasets

Yu Cheng Liu, Chao Hui Lee, Wei Chung Chen, Jhy-Wei Shin, Hui Huang Hsu, Vincent S. Tseng

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Citations (Scopus)

Abstract

Microarray data analysis is a very popular topic of current studies in bioinformatics. Most of the existing methods are focused on clustering-related approaches. However, the relations of genes cannot be generated by clustering mining. Some studies explored association rule mining on microarray, but there is no concrete framework proposed on three-dimensional gene-sample-time microarray datasets yet. In this paper, we proposed a temporal dependency association rule mining method named 3D-TDAR-Mine for three-dimensional analyzing microarray datasets. The mined rules can represent the regulated-relations between genes. Through experimental evaluation, our proposed method can discover the meaningful temporal dependent association rules that are really useful for biologists.

Original languageEnglish
Title of host publicationICS 2010 - International Computer Symposium
Pages759-764
Number of pages6
DOIs
Publication statusPublished - 2010 Dec 1
Event2010 International Computer Symposium, ICS 2010 - Tainan, Taiwan
Duration: 2010 Dec 162010 Dec 18

Publication series

NameICS 2010 - International Computer Symposium

Other

Other2010 International Computer Symposium, ICS 2010
CountryTaiwan
CityTainan
Period10-12-1610-12-18

Fingerprint

Association rules
Microarrays
Genes
Bioinformatics
Concretes

All Science Journal Classification (ASJC) codes

  • Computer Science(all)

Cite this

Liu, Y. C., Lee, C. H., Chen, W. C., Shin, J-W., Hsu, H. H., & Tseng, V. S. (2010). A novel method for mining temporally dependent association rules in three-dimensional microarray datasets. In ICS 2010 - International Computer Symposium (pp. 759-764). [5685410] (ICS 2010 - International Computer Symposium). https://doi.org/10.1109/COMPSYM.2010.5685410
Liu, Yu Cheng ; Lee, Chao Hui ; Chen, Wei Chung ; Shin, Jhy-Wei ; Hsu, Hui Huang ; Tseng, Vincent S. / A novel method for mining temporally dependent association rules in three-dimensional microarray datasets. ICS 2010 - International Computer Symposium. 2010. pp. 759-764 (ICS 2010 - International Computer Symposium).
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Liu, YC, Lee, CH, Chen, WC, Shin, J-W, Hsu, HH & Tseng, VS 2010, A novel method for mining temporally dependent association rules in three-dimensional microarray datasets. in ICS 2010 - International Computer Symposium., 5685410, ICS 2010 - International Computer Symposium, pp. 759-764, 2010 International Computer Symposium, ICS 2010, Tainan, Taiwan, 10-12-16. https://doi.org/10.1109/COMPSYM.2010.5685410

A novel method for mining temporally dependent association rules in three-dimensional microarray datasets. / Liu, Yu Cheng; Lee, Chao Hui; Chen, Wei Chung; Shin, Jhy-Wei; Hsu, Hui Huang; Tseng, Vincent S.

ICS 2010 - International Computer Symposium. 2010. p. 759-764 5685410 (ICS 2010 - International Computer Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

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Liu YC, Lee CH, Chen WC, Shin J-W, Hsu HH, Tseng VS. A novel method for mining temporally dependent association rules in three-dimensional microarray datasets. In ICS 2010 - International Computer Symposium. 2010. p. 759-764. 5685410. (ICS 2010 - International Computer Symposium). https://doi.org/10.1109/COMPSYM.2010.5685410