Analytical description of finite size effects for RNA secondary structures

Tsung-lin Liu, Ralf Bundschuh

Research output: Contribution to journalReview article

Abstract

The ensemble of RNA secondary structure of uniform sequences was discussed. It was found that the crossover function depended on thermodynamic parameters. It was observed that the partition function of the molten phase model was obtained through the recursive relation. Analysis shows that the free base energy of unbound base provides only a negligible effect on the behavior of a stem.

Original languageEnglish
Article number061912
JournalPhysical Review E - Statistical, Nonlinear, and Soft Matter Physics
Volume69
Issue number6 1
DOIs
Publication statusPublished - 2004 Jun 1

All Science Journal Classification (ASJC) codes

  • Statistical and Nonlinear Physics
  • Statistics and Probability
  • Condensed Matter Physics

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