Improved two-level model averaging techniques in Drosophila brain modeling

Cheng Chi Wu, Chao Yu Chen, Hsiu Ming Chang, Ann Shyn Chiang, Yung Chang Chen

Research output: Contribution to journalConference articlepeer-review

2 Citations (Scopus)

Abstract

Two-level model averaging techniques have been proposed to construct the 3D reference template for the Drosophila brain. The surface-based reference template is suitable for integration of experimental data from different laboratories. The 3D distance transform is the most memory and time consuming part in the model averaging algorithm. With the improvement of microscopic scanning technology, images of higher resolution can be acquired. Thus, the memories required for 3D distance transform become critical. In this paper, improved two-level model averaging techniques are proposed with three improvements. A two-scale distance map creation algorithm is introduced to reduce the memory cost in the distance transform. The computational time is reduced by a reduction of computation points in the distance map creation. The third improvement is an outlier rejection module to improve the robustness of the resulting average model.

Original languageEnglish
Pages (from-to)921-931
Number of pages11
JournalLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume5414 LNCS
DOIs
Publication statusPublished - 2009
Event3rd Pacific Rim Symposium on Image and Video Technology, PSIVT 2009 - Tokyo, Japan
Duration: 2009 Jan 132009 Jan 16

All Science Journal Classification (ASJC) codes

  • Theoretical Computer Science
  • General Computer Science

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