TY - JOUR
T1 - Inference for reclassification statistics under nested and non-nested models for biomarker evaluation
AU - Shao, Fang
AU - Li, Jialiang
AU - Fine, Jason
AU - Wong, Weng Kee
AU - Pencina, Michael
N1 - Publisher Copyright:
© 2015 Informa UK Ltd.
PY - 2015/5/19
Y1 - 2015/5/19
N2 - The Net Reclassification Improvement (NRI) and the Integrated Discrimination Improvement (IDI) are used to evaluate the diagnostic accuracy improvement for biomarkers in a wide range of applications. Most applications for these reclassification metrics are confined to nested model comparison. We emphasize the important extensions of these metrics to the non-nested comparison. Non-nested models are important in practice, in particular, in high-dimensional data analysis and in sophisticated semiparametric modeling. We demonstrate that the assessment of accuracy improvement may follow the familiar NRI and IDI evaluation. While the statistical properties of the estimators for NRI and IDI have been well studied in the nested setting, one cannot always rely on these asymptotic results to implement the inference procedure for practical data, especially for testing the null hypothesis of no improvement, and these properties have not been established for the non-nested setting. We propose a generic bootstrap re-sampling procedure for the construction of confidence intervals and hypothesis tests. Extensive simulations and real biomedical data examples illustrate the applicability of the proposed inference methods for both nested and non-nested models.
AB - The Net Reclassification Improvement (NRI) and the Integrated Discrimination Improvement (IDI) are used to evaluate the diagnostic accuracy improvement for biomarkers in a wide range of applications. Most applications for these reclassification metrics are confined to nested model comparison. We emphasize the important extensions of these metrics to the non-nested comparison. Non-nested models are important in practice, in particular, in high-dimensional data analysis and in sophisticated semiparametric modeling. We demonstrate that the assessment of accuracy improvement may follow the familiar NRI and IDI evaluation. While the statistical properties of the estimators for NRI and IDI have been well studied in the nested setting, one cannot always rely on these asymptotic results to implement the inference procedure for practical data, especially for testing the null hypothesis of no improvement, and these properties have not been established for the non-nested setting. We propose a generic bootstrap re-sampling procedure for the construction of confidence intervals and hypothesis tests. Extensive simulations and real biomedical data examples illustrate the applicability of the proposed inference methods for both nested and non-nested models.
UR - http://www.scopus.com/inward/record.url?scp=84940052900&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84940052900&partnerID=8YFLogxK
U2 - 10.3109/1354750X.2015.1068854
DO - 10.3109/1354750X.2015.1068854
M3 - Article
C2 - 26301882
AN - SCOPUS:84940052900
SN - 1354-750X
VL - 20
SP - 240
EP - 252
JO - Biomarkers
JF - Biomarkers
IS - 4
ER -