TY - JOUR
T1 - Improved two-level model averaging techniques in Drosophila brain modeling
AU - Wu, Cheng Chi
AU - Chen, Chao Yu
AU - Chang, Hsiu Ming
AU - Chiang, Ann Shyn
AU - Chen, Yung Chang
PY - 2009
Y1 - 2009
N2 - Two-level model averaging techniques have been proposed to construct the 3D reference template for the Drosophila brain. The surface-based reference template is suitable for integration of experimental data from different laboratories. The 3D distance transform is the most memory and time consuming part in the model averaging algorithm. With the improvement of microscopic scanning technology, images of higher resolution can be acquired. Thus, the memories required for 3D distance transform become critical. In this paper, improved two-level model averaging techniques are proposed with three improvements. A two-scale distance map creation algorithm is introduced to reduce the memory cost in the distance transform. The computational time is reduced by a reduction of computation points in the distance map creation. The third improvement is an outlier rejection module to improve the robustness of the resulting average model.
AB - Two-level model averaging techniques have been proposed to construct the 3D reference template for the Drosophila brain. The surface-based reference template is suitable for integration of experimental data from different laboratories. The 3D distance transform is the most memory and time consuming part in the model averaging algorithm. With the improvement of microscopic scanning technology, images of higher resolution can be acquired. Thus, the memories required for 3D distance transform become critical. In this paper, improved two-level model averaging techniques are proposed with three improvements. A two-scale distance map creation algorithm is introduced to reduce the memory cost in the distance transform. The computational time is reduced by a reduction of computation points in the distance map creation. The third improvement is an outlier rejection module to improve the robustness of the resulting average model.
UR - http://www.scopus.com/inward/record.url?scp=60149110786&partnerID=8YFLogxK
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U2 - 10.1007/978-3-540-92957-4_80
DO - 10.1007/978-3-540-92957-4_80
M3 - Conference article
AN - SCOPUS:60149110786
SN - 0302-9743
VL - 5414 LNCS
SP - 921
EP - 931
JO - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
JF - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
T2 - 3rd Pacific Rim Symposium on Image and Video Technology, PSIVT 2009
Y2 - 13 January 2009 through 16 January 2009
ER -