Literature extraction of protein functions using sentence pattern mining

Jung-Hsien Chiang, Hsu Chun Yu

研究成果: Article同行評審

15 引文 斯高帕斯(Scopus)

摘要

With the rapid growth of articles of genomics research, it has become a challenge for biomedical researchers to access this ever-increasing quantity of information to understand the newest discovery of functions of proteins they are studying. To facilitate functional annotation of proteins by utilizing the huge amounts of biomedical literature and transforming the knowledge into easily accessible database formats, the text mining technique thus becomes essential. In this paper, we propose the method of sentence pattern mining to extract protein functions from biomedical literature. To recognize variants of function terms correctly, we identify morphological, syntactic, and semantic variation forms. The proposed methods can be used to aid database curators in annotating protein functions and to assist biologists and medical researchers in searching protein functions from biomedical literature.

原文English
頁(從 - 到)1088-1098
頁數11
期刊IEEE Transactions on Knowledge and Data Engineering
17
發行號8
DOIs
出版狀態Published - 2005 八月 1

All Science Journal Classification (ASJC) codes

  • Information Systems
  • Computer Science Applications
  • Computational Theory and Mathematics

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