TY - JOUR
T1 - VNM
T2 - An R package for finding multiple-objective optimal designs for the 4-parameter logistic model
AU - Hyun, Seung Won
AU - Wong, Weng Kee
AU - Yang, Yarong
N1 - Funding Information:
The research of Wong reported in this paper was partially supported by the National Institute of General Medical Sciences of the National Institutes of Health under Award Number R01GM107639. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. We appreciate Dr. Zhongfa Zhang’s help to build the package. We are grateful to the editors as well as the referees for their helpful comments and suggestions.
Publisher Copyright:
© 2018, American Statistical Association. All rights reserved.
PY - 2018
Y1 - 2018
N2 - A multiple-objective optimal design is useful for dose-response studies because it can incorporate several objectives at the design stage. Objectives can be of varying interests and a properly constructed multiple-objective optimal design can provide user-specified efficiencies, delivering higher efficiencies for the more important objectives. In this work, we introduce the VNM package written in R for finding 3-objective locally optimal designs for the 4-parameter logistic (4PL) model widely used in education, bioscience and in the manufacturing industry. The package implements the methodology to construct multiple-objective optimal designs in Hyun and Wong (2015). As illustrative examples, we focus on a biomedical application where our objectives are to estimate: (1) the shape of the dose-response curve, (2) the median effective dose level (ED50) and (3) the minimum effective dose level (MED) in the 4PL model. Our VNM package uses a state-of-the-art algorithm to generate multiple-objective optimal designs that meet the user-specified efficiency requirement for each objective, provides tools for calculating the efficiency of the generated design under each objective and also a plot for confirming optimality of the VNM-generated design. The package can also be used to determine an optimal scheme for allocating subjects to the various doses when the number and doses of the drug are fixed in advance.
AB - A multiple-objective optimal design is useful for dose-response studies because it can incorporate several objectives at the design stage. Objectives can be of varying interests and a properly constructed multiple-objective optimal design can provide user-specified efficiencies, delivering higher efficiencies for the more important objectives. In this work, we introduce the VNM package written in R for finding 3-objective locally optimal designs for the 4-parameter logistic (4PL) model widely used in education, bioscience and in the manufacturing industry. The package implements the methodology to construct multiple-objective optimal designs in Hyun and Wong (2015). As illustrative examples, we focus on a biomedical application where our objectives are to estimate: (1) the shape of the dose-response curve, (2) the median effective dose level (ED50) and (3) the minimum effective dose level (MED) in the 4PL model. Our VNM package uses a state-of-the-art algorithm to generate multiple-objective optimal designs that meet the user-specified efficiency requirement for each objective, provides tools for calculating the efficiency of the generated design under each objective and also a plot for confirming optimality of the VNM-generated design. The package can also be used to determine an optimal scheme for allocating subjects to the various doses when the number and doses of the drug are fixed in advance.
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U2 - 10.18637/jss.v083.i05
DO - 10.18637/jss.v083.i05
M3 - Article
AN - SCOPUS:85042475443
SN - 1548-7660
VL - 83
JO - Journal of Statistical Software
JF - Journal of Statistical Software
ER -